RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 FMNL3Q8IVF7 1028 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 FAM71BQ8TC56 605 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 AENQ8WTP8 325 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ZNF333Q96JL9 665 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TWNKQ96RR1 684 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ZSWIM1Q9BR11 485 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 THAP2Q9H0W7 228 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PLEKHA5Q9HAU0 1116 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 RNF14Q9UBS8 474 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 NFU1Q9UMS0 254 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TRIP11Q15643 1979 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SPTLC1O15269 473 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ATF7P17544 494 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PDE6CP51160 858 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 APBB1IPQ7Z5R6 666 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 LRRC57Q8N9N7 239 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PAAF1Q9BRP4 392 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PPP1R12CQ9BZL4 782 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SNX9Q9Y5X1 595 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ATMINO43313 823 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 NBNO60934 754 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 POMCP01189 267 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 HSPA1AP0DMV8 641 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 HSPA1BP0DMV9 641 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ITGA4P13612 1032 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SCNN1GP51170 649 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 RBP5P82980 135 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 GUCY2DQ02846 1103 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 KCTD16Q68DU8 428 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 LLGL2Q6P1M3 1020 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ENOSF1Q7L5Y1 443 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 DPH6Q7L8W6 267 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SYCE1Q8N0S2 351 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CPA5Q8WXQ8 436 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ARHGEF26Q96DR7 871 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 AP1M1Q9BXS5 423 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 INPP5FQ9Y2H2 1132 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ANK1P16157 1881 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 GOLGA6BA6NDN3 693 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 BUB1BO60566 1050 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 FTLP02792 175 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 GNA15P30679 374 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TCTN1Q2MV58 587 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TRIM60Q495X7 471 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 FAM26DQ5JW98 314 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 C9orf57Q5W0N0 161 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 RFFLQ8WZ73 363 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TFAP2BQ92481 460 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 LPIN3Q9BQK8 851 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 EPB41L5Q9HCM4 733 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ITGA11Q9UKX5 1188 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 INTUQ9ULD6 942 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 NENFQ9UMX5 172 aa13.48□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ARL5CA6NH57 179 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TMEM110-MUSTN1A8MSY1 372 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 HEXIM1O94992 359 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CD4P01730 458 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 KRT14P02533 472 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TMEM253P0C7T8 217 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TBXAS1P24557 533 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CDR2Q01850 454 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TLE2Q04725 743 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 DSC3Q14574 896 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 LRRC8DQ7L1W4 858 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SH2D3CQ8N5H7 860 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 UBR7Q8N806 425 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 DBF4BQ8NFT6 615 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 BEST2Q8NFU1 509 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 LINC01599Q8WXQ3 324 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ARL8AQ96BM9 186 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CYFIP2Q96F07 1278 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CTTNBP2NLQ9P2B4 639 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 AMFRQ9UKV5 643 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 RANBP2P49792 3224 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 THAP12O43422 761 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PAN2Q504Q3 1202 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 FBXO46Q6PJ61 603 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 LRRC31Q6UY01 552 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SLC39A5Q6ZMH5 540 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CD302Q8IX05 232 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 USP38Q8NB14 1042 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CHST12Q9NRB3 414 aa13.47□□□□□ -0.25
CDK5RAP3-217ENST00000580287 A0A0A6YYK5 440 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 A0A0U1RQF3 1178 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CASTOR2A6NHX0 329 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CYP2C18P33260 490 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 MAGEA9P43362 315 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TNNC1P63316 161 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 POU5F1Q01860 360 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 XKR4Q5GH76 650 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 DDX42Q86XP3 938 aaKnown RBP eCLIP13.46□□□□□ -0.256e-10■□□□□ 8.4
CDK5RAP3-217ENST00000580287 WHAMMQ8TF30 809 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ZNF606Q8WXB4 792 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PAWRQ96IZ0 340 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PBKQ96KB5 322 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 MRPL45Q9BRJ2 306 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 UBQLN1Q9UMX0 589 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 NME7Q9Y5B8 376 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 F8W810 466 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CITO14578 2027 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms