RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CC2D1AQ6P1N0 951 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 PKN3Q6P5Z2 889 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SYT13Q7L8C5 426 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 DAW1Q8N136 415 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SNX29Q8TEQ0 813 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 C2orf15Q8WU43 125 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ZBTB45Q96K62 511 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ADAM33Q9BZ11 813 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SMOC1Q9H4F8 434 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 NUP205Q92621 2012 aa13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ZNF638Q14966 1978 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-216ENST00000579853 LOC400499M0QZD8 3231 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ACACAQ13085 2346 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 H0YCG3 227 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SLC16A4O15374 487 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CXCL8P10145 99 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 HOXC13P31276 330 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 MATR3P43243 847 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CYP4F8P98187 520 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 FOXC1Q12948 553 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 PDGFRLQ15198 375 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SH3PXD2AQ5TCZ1 1133 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 KRT79Q5XKE5 535 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 RINT1Q6NUQ1 792 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 KCTD17Q8N5Z5 321 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 NECAB1Q8N987 351 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SEPT5Q99719 369 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 P2RY13Q9BPV8 354 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SLC46A2Q9BY10 475 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TMEM9BQ9NQ34 198 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 DSEQ9UL01 958 aa13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 FARP1Q9Y4F1 1045 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-216ENST00000579853 LNP1A1A4G5 178 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 KHNYNO15037 678 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SCP2P22307 547 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 GUCY2CP25092 1073 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 LILRA4P59901 499 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 MAPK7Q13164 816 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ME3Q16798 604 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 MGAT5BQ3V5L5 792 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 USP39Q53GS9 565 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TTC38Q5R3I4 469 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TCEAL6Q6IPX3 200 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 C1orf186Q6ZWK4 172 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CD302Q8IX05 232 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 IGSF22Q8N9C0 903 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TMEM161BQ8NDZ6 487 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SPPL2BQ8TCT7 592 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TCEAL3Q969E4 200 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SENP8Q96LD8 212 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 HHIPQ96QV1 700 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 EBF3Q9H4W6 596 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 IL21Q9HBE4 155 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 HPS4Q9NQG7 708 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 NOL7Q9UMY1 257 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 WASF3Q9UPY6 502 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 MYH11P35749 1972 aa13.23□□□□□ -0.29
CDK5RAP3-216ENST00000579853 PI4KAP42356 2102 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 E9PMD0 336 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 JAK2O60674 1132 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SOAT2O75908 522 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 EGFP01133 1207 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CYP11A1P05108 521 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 MAPTP10636 758 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 PLS3P13797 630 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 GBP1P32455 592 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 GALK1P51570 392 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 FOSBP53539 338 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 GNL2Q13823 731 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 DMC1Q14565 340 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ZNF268Q14587 947 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SLC39A12Q504Y0 691 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SEZ6Q53EL9 994 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SPATA1Q5VX52 437 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 METTL23Q86XA0 190 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 THEM5Q8N1Q8 247 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CPA6Q8N4T0 437 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 MRPS31Q92665 395 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 BICD1Q96G01 975 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 LPIN3Q9BQK8 851 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 RUSC1Q9BVN2 902 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 RPF1Q9H9Y2 349 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 KCND2Q9NZV8 630 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TBX20Q9UMR3 447 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 BPTFQ12830 3046 aa13.22□□□□□ -0.29
CDK5RAP3-216ENST00000579853 THADAQ6YHU6 1953 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 DENND4CQ5VZ89 1909 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 LACTBL1A8MY62 500 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 LAD1O00515 517 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 GIPC1O14908 333 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ADRB2P07550 413 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 ATF6P18850 670 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 DGKEP52429 567 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 SPAG1Q07617 926 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 NR1H3Q13133 447 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 PMS2CLQ68D20 193 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 CYP2U1Q7Z449 544 aa13.21□□□□□ -0.29
CDK5RAP3-216ENST00000579853 TTC9BQ8N6N2 239 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms