RNA–Protein interactions for RNA: ENST00000579415.5

PPP4R1-212, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-212ENST00000579415 ACKR2O00590 384 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 RRP8O43159 456 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 PRPF3O43395 683 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 OR4Q2P0C623 313 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 ATXN1LP0C7T5 689 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 HLA-EP13747 358 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 MARCKSP29966 332 aaPredicted RBP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 SEC13P55735 322 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 MRPS21P82921 87 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 NUCB1Q02818 461 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 RPL6Q02878 288 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 YWHAHQ04917 246 aaPredicted RBP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 ZNF33AQ06730 810 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 GPR17Q13304 367 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 CTTNQ14247 550 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 SMAD1Q15797 465 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 DCAF4L1Q3SXM0 396 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 EEF1DP3Q658K8 133 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 ZBTB8OSQ8IWT0 167 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 ATAD1Q8NBU5 361 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 CCDC148Q8NFR7 591 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 SETD7Q8WTS6 366 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 WBP1Q96G27 269 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 DYDC2Q96IM9 177 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 PNMA5Q96PV4 448 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 KCNMB3Q9NPA1 279 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 ANKEF1Q9NU02 776 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 BCCIPQ9P287 314 aaKnown RBP eCLIP8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 HSFX1Q9UBD0 423 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 PCDHB8Q9UN66 801 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 USP20Q9Y2K6 914 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 PLXNB3Q9ULL4 1909 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 GON4LQ3T8J9 2241 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 COL12A1Q99715 3063 aa8.69□□□□□ -1.02
PPP4R1-212ENST00000579415 PDCD11Q14690 1871 aaKnown RBP8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 PTPRQQ9UMZ3 2332 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 CCDC196A0A1B0GTZ2 297 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 ANTXRLA6NF34 631 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 OR6C75A6NL08 312 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 SLC37A4O43826 429 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 SOAT2O75908 522 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 SLITRK3O94933 977 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 LYPLA2O95372 231 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 DDX6P26196 483 aaKnown RBP eCLIP8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 MCM4P33991 863 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 CSRP3P50461 194 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 RCAN1P53805 252 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 NR1H3Q13133 447 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 PLEKHG6Q3KR16 790 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 HSF5Q4G112 596 aaPredicted RBP8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 TAF1BQ53T94 588 aaPredicted RBP8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 PPP4R3AQ6IN85 833 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 SLC36A4Q6YBV0 504 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 TPH2Q8IWU9 490 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 DEFB119Q8N690 84 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 TTC9BQ8N6N2 239 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 MAB21L3Q8N8X9 362 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 BAHD1Q8TBE0 780 aaPredicted RBP8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 OSCP1Q8WVF1 389 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 HMGB4Q8WW32 186 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 ATP2A3Q93084 1043 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 ZMAT2Q96NC0 199 aaKnown RBP8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 CDC6Q99741 560 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 ZDHHC5Q9C0B5 715 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 C2orf40Q9H1Z8 148 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 FAM124BQ9H5Z6 455 aaPredicted RBP8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 TOPORSQ9NS56 1045 aaPredicted RBP8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 DUS2Q9NX74 493 aaKnown RBP8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 DNMT3LQ9UJW3 386 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 MGAQ8IWI9 3026 aa8.68□□□□□ -1.02
PPP4R1-212ENST00000579415 TEP1Q99973 2627 aaKnown RBP8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 ATMQ13315 3056 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 KLF18A0A0U1RQI7 1052 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 MTMR11A4FU01 709 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 SGK1O00141 431 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 SLC27A2O14975 620 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 TLX3O43711 291 aaPredicted RBP8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 GSPT1P15170 499 aaKnown RBP8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 KCNE1P15382 129 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 TUFMP49411 452 aaKnown RBP8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 RARRES1P49788 294 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 YARSP54577 528 aaKnown RBP8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 EXOSC10Q01780 885 aaKnown RBP8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 NOTCH2Q04721 2471 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 SCRN1Q12765 414 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 ZNF268Q14587 947 aaPredicted RBP8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 MTF1Q14872 753 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 VEPH1Q14D04 833 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 DBX2Q6ZNG2 339 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 APBB1IPQ7Z5R6 666 aaPredicted RBP8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 TMEM150AQ86TG1 271 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 PGBD3Q8N328 593 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 ALLCQ8N6M5 410 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 IL17RCQ8NAC3 791 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 TXNDC5Q8NBS9 432 aaKnown RBP8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 SPRYD3Q8NCJ5 442 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 LPIN3Q9BQK8 851 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 CCDC113Q9H0I3 377 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 GPRC5CQ9NQ84 441 aa8.67□□□□□ -1.02
PPP4R1-212ENST00000579415 VPS54Q9P1Q0 977 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms