RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 MMS19Q96T76 1030 aa25.66■■□□□ 1.7
LIMD2-207ENST00000579329 CRISPLD1Q9H336 500 aa25.66■■□□□ 1.7
LIMD2-207ENST00000579329 AVENQ9NQS1 362 aaPredicted RBP25.66■■□□□ 1.7
LIMD2-207ENST00000579329 ZFP37Q9Y6Q3 630 aaPredicted RBP25.66■■□□□ 1.7
LIMD2-207ENST00000579329 PCSK1P29120 753 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 ALDH1A3P47895 512 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 TNNC1P63316 161 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 LRRC63Q05C16 580 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 NCOA4Q13772 614 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 ZACNQ401N2 412 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 INTS6LQ5JSJ4 861 aaKnown RBP25.65■■□□□ 1.7
LIMD2-207ENST00000579329 LRRTM3Q86VH5 581 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 ZNF512Q96ME7 567 aaPredicted RBP25.65■■□□□ 1.7
LIMD2-207ENST00000579329 XYLT2Q9H1B5 865 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 CDH7Q9ULB5 785 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 SORCS3Q9UPU3 1222 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 SLC27A5Q9Y2P5 690 aa25.65■■□□□ 1.7
LIMD2-207ENST00000579329 ASGR2P07307 311 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 EPB41P11171 864 aaKnown RBP25.64■■□□□ 1.7
LIMD2-207ENST00000579329 WARSP23381 471 aaKnown RBP25.64■■□□□ 1.7
LIMD2-207ENST00000579329 TUFMP49411 452 aaKnown RBP25.64■■□□□ 1.7
LIMD2-207ENST00000579329 EPHB3P54753 998 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 MORC3Q14149 939 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 NFE2Q16621 373 aaPredicted RBP25.64■■□□□ 1.7
LIMD2-207ENST00000579329 ZNF699Q32M78 642 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 WDR72Q3MJ13 1102 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 KBTBD7Q8WVZ9 684 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 EDAQ92838 391 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 DHTKD1Q96HY7 919 aaPredicted RBP25.64■■□□□ 1.7
LIMD2-207ENST00000579329 CORO1BQ9BR76 489 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 VRTNQ9H8Y1 702 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 CEP72Q9P209 647 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 MRPS23Q9Y3D9 190 aaKnown RBP25.64■■□□□ 1.7
LIMD2-207ENST00000579329 PCDHB5Q9Y5E4 795 aa25.64■■□□□ 1.7
LIMD2-207ENST00000579329 CLSTN1O94985 981 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 FAM163BP0C2L3 166 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 LAMP2P13473 410 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 ACAT1P24752 427 aaKnown RBP25.63■■□□□ 1.69
LIMD2-207ENST00000579329 CCNE1P24864 410 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 ZXDAP98168 799 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 FKBP3Q00688 224 aaKnown RBP25.63■■□□□ 1.69
LIMD2-207ENST00000579329 C1orf220Q5T0J3 134 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 ANKRD40Q6AI12 368 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 SV2AQ7L0J3 742 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 ZC3H3Q8IXZ2 948 aaKnown RBP25.63■■□□□ 1.69
LIMD2-207ENST00000579329 TTC9BQ8N6N2 239 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 LEMD2Q8NC56 503 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 ITFG1Q8TB96 612 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 SEPT5Q99719 369 aaPredicted RBP25.63■■□□□ 1.69
LIMD2-207ENST00000579329 ABI2Q9NYB9 513 aaPredicted RBP25.63■■□□□ 1.69
LIMD2-207ENST00000579329 IGSF9Q9P2J2 1179 aa25.63■■□□□ 1.69
LIMD2-207ENST00000579329 BIN1O00499 593 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 TACC1O75410 805 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 VNN1O95497 513 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 TRIM49P0CI25 452 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 TRIM49CP0CI26 452 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 PMS1P54277 932 aaKnown RBP25.62■■□□□ 1.69
LIMD2-207ENST00000579329 MTMR3Q13615 1198 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 MGAT5BQ3V5L5 792 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 ZNF667Q5HYK9 610 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 CYP4A22Q5TCH4 519 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 PDZD4Q76G19 769 aaPredicted RBP25.62■■□□□ 1.69
LIMD2-207ENST00000579329 TRIML1Q8N9V2 468 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 FGF13Q92913 245 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 EEF2KMTQ96G04 330 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 GBP4Q96PP9 640 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 ASAH2Q9NR71 780 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 TMLHEQ9NVH6 421 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 NXF1Q9UBU9 619 aaKnown RBP25.62■■□□□ 1.69
LIMD2-207ENST00000579329 CDH9Q9ULB4 789 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 ASB3Q9Y575 518 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 DOCK6Q96HP0 2047 aa25.62■■□□□ 1.69
LIMD2-207ENST00000579329 DOCK8Q8NF50 2099 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 TRIM49BA6NDI0 452 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 ZNF197O14709 1029 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 SLC16A3O15427 465 aaKnown RBP25.61■■□□□ 1.69
LIMD2-207ENST00000579329 HAPLN1P10915 354 aaPredicted RBP25.61■■□□□ 1.69
LIMD2-207ENST00000579329 CD44P16070 742 aaKnown RBP25.61■■□□□ 1.69
LIMD2-207ENST00000579329 PIK3CAP42336 1068 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 CAMK4Q16566 473 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 SLC5A9Q2M3M2 681 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 NXPE3Q969Y0 559 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 PKMYT1Q99640 499 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 SYT15Q9BQS2 421 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 DNAJC25Q9H1X3 360 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 SNX25Q9H3E2 840 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 KCNK12Q9HB15 430 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 NOTCH4Q99466 2003 aa25.61■■□□□ 1.69
LIMD2-207ENST00000579329 HCRTO43612 131 aa25.6■■□□□ 1.69
LIMD2-207ENST00000579329 SOAT2O75908 522 aa25.6■■□□□ 1.69
LIMD2-207ENST00000579329 BMP6P22004 513 aa25.6■■□□□ 1.69
LIMD2-207ENST00000579329 GCLMP48507 274 aa25.6■■□□□ 1.69
LIMD2-207ENST00000579329 EPHA5P54756 1037 aa25.6■■□□□ 1.69
LIMD2-207ENST00000579329 MCCD1P59942 119 aaPredicted RBP25.6■■□□□ 1.69
LIMD2-207ENST00000579329 PPP3CAQ08209 521 aa25.6■■□□□ 1.69
LIMD2-207ENST00000579329 SGSM1Q2NKQ1 1148 aa25.6■■□□□ 1.69
LIMD2-207ENST00000579329 PRSS36Q5K4E3 855 aa25.6■■□□□ 1.69
LIMD2-207ENST00000579329 KLHL10Q6JEL2 608 aa25.6■■□□□ 1.69
LIMD2-207ENST00000579329 ITIH5Q86UX2 942 aa25.6■■□□□ 1.69
LIMD2-207ENST00000579329 NPAS3Q8IXF0 933 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms