RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 SNW1Q13573 536 aaKnown RBP15.93■□□□□ 0.14
SS18-212ENST00000579061 SOWAHAQ2M3V2 549 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 INTS6LQ5JSJ4 861 aaKnown RBP15.93■□□□□ 0.14
SS18-212ENST00000579061 PARM1Q6UWI2 310 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 ADGRF2Q8IZF7 708 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 HS6ST3Q8IZP7 471 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 ING5Q8WYH8 240 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 ZNF516Q92618 1163 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 PSMG2Q969U7 264 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 TCEAL4Q96EI5 215 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 MCRS1Q96EZ8 462 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 PRRX2Q99811 253 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 LRRC3Q9BY71 257 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 GPR88Q9GZN0 384 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 PCDHB5Q9Y5E4 795 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 MUC6Q6W4X9 2439 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 DENND4CQ5VZ89 1909 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 MOSPD3O75425 235 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 CST3P01034 146 aaPredicted RBP15.92■□□□□ 0.14
SS18-212ENST00000579061 PDGFBP01127 241 aaPredicted RBP15.92■□□□□ 0.14
SS18-212ENST00000579061 HAPLN1P10915 354 aaPredicted RBP15.92■□□□□ 0.14
SS18-212ENST00000579061 MYL4P12829 197 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 ATICP31939 592 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 NUBP1P53384 320 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 VEPH1Q14D04 833 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 MGAT5BQ3V5L5 792 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 OSTM1Q86WC4 334 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 TMC8Q8IU68 726 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 ELOA2Q8IYF1 753 aaPredicted RBP15.92■□□□□ 0.14
SS18-212ENST00000579061 TTC9BQ8N6N2 239 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 PLEKHO2Q8TD55 490 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 TMC2Q8TDI7 906 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 SYAP1Q96A49 352 aaPredicted RBP15.92■□□□□ 0.14
SS18-212ENST00000579061 GSDMAQ96QA5 445 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 GTPBP4Q9BZE4 634 aaKnown RBP15.92■□□□□ 0.14
SS18-212ENST00000579061 VRTNQ9H8Y1 702 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 ABCB6Q9NP58 842 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 RMND1Q9NWS8 449 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 HOOK1Q9UJC3 728 aaKnown RBP15.92■□□□□ 0.14
SS18-212ENST00000579061 FBXL21Q9UKT6 434 aa15.92■□□□□ 0.14
SS18-212ENST00000579061 LRRIQ3A6PVS8 624 aaPredicted RBP15.91■□□□□ 0.14
SS18-212ENST00000579061 TACC1O75410 805 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 WARSP23381 471 aaKnown RBP15.91■□□□□ 0.14
SS18-212ENST00000579061 RPL13P26373 211 aaKnown RBP15.91■□□□□ 0.14
SS18-212ENST00000579061 AVPR2P30518 371 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 CLCN5P51795 746 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 ENPEPQ07075 957 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 TRPC3Q13507 836 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 COBLL1Q53SF7 1204 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 POTEHQ6S545 545 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 DNAJB7Q7Z6W7 309 aaPredicted RBP15.91■□□□□ 0.14
SS18-212ENST00000579061 ELSPBP1Q96BH3 223 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 FUBP3Q96I24 572 aaKnown RBP eCLIP15.91■□□□□ 0.14
SS18-212ENST00000579061 PKMYT1Q99640 499 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 SEPT5Q99719 369 aaPredicted RBP15.91■□□□□ 0.14
SS18-212ENST00000579061 RPP25Q9BUL9 199 aaKnown RBP15.91■□□□□ 0.14
SS18-212ENST00000579061 MFSD1Q9H3U5 465 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 ABI2Q9NYB9 513 aaPredicted RBP15.91■□□□□ 0.14
SS18-212ENST00000579061 FRMD4BQ9Y2L6 1034 aa15.91■□□□□ 0.14
SS18-212ENST00000579061 PTPRDP23468 1912 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 IKBKBO14920 756 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 PHACTR2O75167 634 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 SMC2O95347 1197 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 C4BPAP04003 597 aaKnown RBP15.9■□□□□ 0.14
SS18-212ENST00000579061 CFHP08603 1231 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 ATF6P18850 670 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 CASP4P49662 377 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 PNOCQ13519 176 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 EDRF1Q3B7T1 1238 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 ZCWPW2Q504Y3 356 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 CEP135Q66GS9 1140 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 ASTLQ6HA08 431 aaPredicted RBP15.9■□□□□ 0.14
SS18-212ENST00000579061 FAM171BQ6P995 826 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 SPATA20Q8TB22 786 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 SHKBP1Q8TBC3 707 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 GPR152Q8TDT2 470 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 KBTBD7Q8WVZ9 684 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 ASB16Q96NS5 453 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 MMS19Q96T76 1030 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 KXD1Q9BQD3 176 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 XYLT2Q9H1B5 865 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 TRPV4Q9HBA0 871 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 ZFP14Q9HCL3 533 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 TMLHEQ9NVH6 421 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 CDH9Q9ULB4 789 aa15.9■□□□□ 0.14
SS18-212ENST00000579061 NUP210Q8TEM1 1887 aaPredicted RBP15.89■□□□□ 0.13
SS18-212ENST00000579061 SOAT2O75908 522 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 NR2F2P24468 414 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 ACAT1P24752 427 aaKnown RBP15.89■□□□□ 0.13
SS18-212ENST00000579061 VCPP55072 806 aaKnown RBP15.89■□□□□ 0.13
SS18-212ENST00000579061 MCCD1P59942 119 aaPredicted RBP15.89■□□□□ 0.13
SS18-212ENST00000579061 MYL6P60660 151 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 TNNC1P63316 161 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 PFKPQ01813 784 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 BIRC3Q13489 604 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 MAPRE1Q15691 268 aaKnown RBP15.89■□□□□ 0.13
SS18-212ENST00000579061 WDR72Q3MJ13 1102 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 CFAP221Q4G0U5 840 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 ZNF658Q5TYW1 1059 aaPredicted RBP15.89■□□□□ 0.13
SS18-212ENST00000579061 TDRD10Q5VZ19 366 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms