RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 C1orf127Q8N9H9 656 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 LINC00301Q8NCQ3 95 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 STKLD1Q8NE28 680 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TTC16Q8NEE8 873 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SPPL2BQ8TCT7 592 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CACTINQ8WUQ7 758 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CLDN23Q96B33 292 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 DHX58Q96C10 678 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 RSPRY1Q96DX4 576 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ZFYVE19Q96K21 471 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ZNF396Q96N95 335 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PI4K2AQ9BTU6 479 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MTMR12Q9C0I1 747 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SMG9Q9H0W8 520 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TNMDQ9H2S6 317 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 LMAN1LQ9HAT1 526 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TRPV4Q9HBA0 871 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PDE11AQ9HCR9 933 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 DDX43Q9NXZ2 648 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PCDHB5Q9Y5E4 795 aa9.92□□□□□ -0.82
CDK5RAP3-211ENST00000578996 FRMD3A2A2Y4 597 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SHISA7A6NL88 538 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CHADO15335 359 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 EXTL3O43909 919 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PRPF40AO75400 957 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 HAPLN1P10915 354 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ACAT1P24752 427 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CDC25CP30307 473 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 NASPP49321 788 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 GPR15P49685 360 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ASIC1P78348 528 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MYL7Q01449 175 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SMARCB1Q12824 385 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PPP2R5DQ14738 602 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ZNF528Q3MIS6 628 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SDHAF4Q5VUM1 108 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 HSCBQ8IWL3 235 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PDCL2Q8N4E4 241 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 DCLK2Q8N568 766 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 GLIS3Q8NEA6 775 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 C2orf15Q8WU43 125 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 RUBCNQ92622 972 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 BORCS6Q96GS4 357 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ANKRD36BP1Q96IX9 119 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MKNK1Q9BUB5 465 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 LRRC27Q9C0I9 530 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TRPV5Q9NQA5 729 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TMLHEQ9NVH6 421 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ZSCAN32Q9NX65 697 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 NCDNQ9UBB6 729 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 HSFX1Q9UBD0 423 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ITGA11Q9UKX5 1188 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 L1RE1Q9UN81 338 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PCDHGA2Q9Y5H1 932 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SNX9Q9Y5X1 595 aa9.91□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TICRRQ7Z2Z1 1910 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ANK1P16157 1881 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SPECC1L-ADORA2AF8WAN1 911 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ARNTLO00327 626 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PPP6R2O75170 966 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CLSTN1O94985 981 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PRAMEF12O95522 483 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TNNC2P02585 160 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 AVPR1AP37288 418 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 RBP5P82980 135 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 AMPD3Q01432 767 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 FCHO2Q0JRZ9 810 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 FZD5Q13467 585 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ARHGAP29Q52LW3 1261 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SCARA3Q6AZY7 606 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ADGRF2Q8IZF7 708 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 LRRC52Q8N7C0 313 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MAB21L3Q8N8X9 362 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 RDH13Q8NBN7 331 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 SPRYD3Q8NCJ5 442 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 BPIFB1Q8TDL5 484 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 LRRC3BQ96PB8 259 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TRIM9Q9C026 710 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 CHRDQ9H2X0 955 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 TASP1Q9H6P5 420 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 C8orf33Q9H7E9 229 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PRMT8Q9NR22 394 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 RBM12Q9NTZ6 932 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 GTSE1Q9NYZ3 720 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 GTF3C4Q9UKN8 822 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 MORC2Q9Y6X9 1032 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 PATJQ8NI35 1801 aa9.9□□□□□ -0.82
CDK5RAP3-211ENST00000578996 ZNF233A6NK53 670 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 HCRTO43612 131 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CUTAO60888 179 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 YEATS4O95619 227 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CSH1P0DML2 217 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CSH2P0DML3 217 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CHRNB1P11230 501 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CYP2F1P24903 491 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CCR3P51677 355 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TNK2Q07912 1038 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MYO1EQ12965 1108 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 LRRC32Q14392 662 aa9.89□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PON2Q15165 354 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms