RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 PDGFRBP09619 1106 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 TRIM49P0CI25 452 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 TRIM49CP0CI26 452 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
ERBB2-207ENST00000578502 ATF6P18850 670 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 BMP6P22004 513 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 PAX3P23760 479 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 ANP32AP39687 249 aaKnown RBP11.31□□□□□ -0.6
ERBB2-207ENST00000578502 RAP1GAPP47736 663 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 PSMC1P62191 440 aaKnown RBP11.31□□□□□ -0.6
ERBB2-207ENST00000578502 SIGLEC14Q08ET2 396 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 MYO1EQ12965 1108 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 TDGQ13569 410 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 MTMR3Q13615 1198 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 STXBP5Q5T5C0 1151 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 TMC8Q8IU68 726 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 SLC44A3Q8N4M1 653 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 TOP6BLQ8N6T0 577 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 SPATA20Q8TB22 786 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 SHKBP1Q8TBC3 707 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 GIPC2Q8TF65 315 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 TMEM174Q8WUU8 243 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 PBXIP1Q96AQ6 731 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 ZNF512Q96ME7 567 aaPredicted RBP11.31□□□□□ -0.6
ERBB2-207ENST00000578502 TIGD1Q96MW7 591 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 PKMYT1Q99640 499 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 KXD1Q9BQD3 176 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 PI4K2AQ9BTU6 479 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 OXCT2Q9BYC2 517 aaPredicted RBP11.31□□□□□ -0.6
ERBB2-207ENST00000578502 PLA2G2FQ9BZM2 168 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 XYLT2Q9H1B5 865 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 ABI2Q9NYB9 513 aaPredicted RBP11.31□□□□□ -0.6
ERBB2-207ENST00000578502 NXF1Q9UBU9 619 aaKnown RBP11.31□□□□□ -0.6
ERBB2-207ENST00000578502 MAN1B1Q9UKM7 699 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 GTF3C4Q9UKN8 822 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 ZNF318Q5VUA4 2279 aa11.31□□□□□ -0.6
ERBB2-207ENST00000578502 TRIM49BA6NDI0 452 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 BIN1O00499 593 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 GABRDO14764 452 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 PHACTR2O75167 634 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 PRPF40AO75400 957 aaKnown RBP11.3□□□□□ -0.6
ERBB2-207ENST00000578502 CFHP08603 1231 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 HAPLN1P10915 354 aaPredicted RBP11.3□□□□□ -0.6
ERBB2-207ENST00000578502 CYP2F1P24903 491 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 CDH8P55286 799 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 CLDN10P78369 228 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 PPP3CAQ08209 521 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 ADAM9Q13443 819 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 BIRC3Q13489 604 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 TRPC3Q13507 836 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 TEAD2Q15562 447 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 WDR72Q3MJ13 1102 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 MGAT5BQ3V5L5 792 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 INTS6LQ5JSJ4 861 aaKnown RBP11.3□□□□□ -0.6
ERBB2-207ENST00000578502 ZNF658Q5TYW1 1059 aaPredicted RBP11.3□□□□□ -0.6
ERBB2-207ENST00000578502 ANKRD40Q6AI12 368 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 SPOPLQ6IQ16 392 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 SCARA5Q6ZMJ2 495 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 PDZD4Q76G19 769 aaPredicted RBP11.3□□□□□ -0.6
ERBB2-207ENST00000578502 RTL10Q7L3V2 364 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 DNAJB7Q7Z6W7 309 aaPredicted RBP11.3□□□□□ -0.6
ERBB2-207ENST00000578502 TMEM86AQ8N2M4 240 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 SMARCE1Q969G3 411 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 MMS19Q96T76 1030 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 ACBD6Q9BR61 282 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 DPEP3Q9H4B8 488 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 SMYD3Q9H7B4 428 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 MMRN2Q9H8L6 949 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 CRTAC1Q9NQ79 661 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
ERBB2-207ENST00000578502 R3HCC1Q9Y3T6 440 aaKnown RBP11.3□□□□□ -0.6
ERBB2-207ENST00000578502 A0A1W2PRU2 124 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 KINO60870 393 aaKnown RBP11.29□□□□□ -0.6
ERBB2-207ENST00000578502 SMC2O95347 1197 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 FCARP24071 287 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 ALDH1A3P47895 512 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 GCLMP48507 274 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 EPHB3P54753 998 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 VCPP55072 806 aaKnown RBP11.29□□□□□ -0.6
ERBB2-207ENST00000578502 MYL7Q01449 175 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 TSPY1Q01534 308 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 ORC1Q13415 861 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 NCOA4Q13772 614 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 CAMK4Q16566 473 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 NFIL3Q16649 462 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 DDR2Q16832 855 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 FAM78AQ5JUQ0 283 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 CYP4A22Q5TCH4 519 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 TANGO2Q6ICL3 276 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 IQCEQ6IPM2 695 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 GAREM2Q75VX8 874 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 SV2AQ7L0J3 742 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 FAM186BQ8IYM0 893 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 UBALD2Q8IYN6 164 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 DCP1BQ8IZD4 617 aaKnown RBP11.29□□□□□ -0.6
ERBB2-207ENST00000578502 ADSSL1Q8N142 457 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 ELMOD1Q8N336 334 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 FAM200AQ8TCP9 573 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 GSDMAQ96QA5 445 aa11.29□□□□□ -0.6
ERBB2-207ENST00000578502 SYT15Q9BQS2 421 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms