RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 LHX1P48742 406 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 TUFMP49411 452 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 NTHL1P78549 312 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 TWF1Q12792 350 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 DUSP4Q13115 394 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 SOWAHAQ2M3V2 549 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 EDRF1Q3B7T1 1238 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 ZCWPW2Q504Y3 356 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 ZNF658Q5TYW1 1059 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 DCP1BQ8IZD4 617 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 ATAD1Q8NBU5 361 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 LEMD2Q8NC56 503 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 PLEKHO2Q8TD55 490 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 TMC2Q8TDI7 906 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 FGF13Q92913 245 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 SMARCE1Q969G3 411 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 ZNF512Q96ME7 567 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 PGLYRP2Q96PD5 576 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 ACBD6Q9BR61 282 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 SEMA4AQ9H3S1 761 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 KCNK12Q9HB15 430 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 MAPK8IP1Q9UQF2 711 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 YIPF1Q9Y548 306 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 PCDHA5Q9Y5H7 936 aa14.65□□□□□ -0.06
CSNK1D-208ENST00000578501 ZNF197O14709 1029 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 IKBKBO14920 756 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 CST3P01034 146 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 ASGR2P07307 311 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 NR2F2P24468 414 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 ATICP31939 592 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 ALDH1A3P47895 512 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 CASP4P49662 377 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 EPHA5P54756 1037 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 MCCD1P59942 119 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 MYL7Q01449 175 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 TSPY1Q01534 308 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 TDGQ13569 410 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 SLC39A12Q504Y0 691 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 IQCEQ6IPM2 695 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 DGLUCYQ7Z3D6 616 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 LRRTM3Q86VH5 581 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 ADGRF2Q8IZF7 708 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 SPPL2BQ8TCT7 592 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 CRISPLD1Q9H336 500 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 VRTNQ9H8Y1 702 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 DDX43Q9NXZ2 648 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 GDE1Q9NZC3 331 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 CEP72Q9P209 647 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 ASB3Q9Y575 518 aa14.64□□□□□ -0.07
CSNK1D-208ENST00000578501 LRRIQ3A6PVS8 624 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 GADD45BO75293 160 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 C4BPAP04003 597 aaKnown RBP14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 PCSK1P29120 753 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 PRCPP42785 496 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 EPHB3P54753 998 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 UBE2HP62256 183 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 ADAM9Q13443 819 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 TRPC3Q13507 836 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 NFE2Q16621 373 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 PRSS36Q5K4E3 855 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 CEP135Q66GS9 1140 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 INTS8Q75QN2 995 aaKnown RBP14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 ITFG1Q8TB96 612 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 SYAP1Q96A49 352 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 CORO1BQ9BR76 489 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 XYLT2Q9H1B5 865 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 SLC27A5Q9Y2P5 690 aa14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 MRPS23Q9Y3D9 190 aaKnown RBP14.63□□□□□ -0.07
CSNK1D-208ENST00000578501 PHACTR2O75167 634 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 TACC1O75410 805 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 AKAP3O75969 853 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 WARSP23381 471 aaKnown RBP14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 PSMC2P35998 433 aaKnown RBP14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 HTR4Q13639 388 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 SLC5A9Q2M3M2 681 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 ZACNQ401N2 412 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 INTS6LQ5JSJ4 861 aaKnown RBP14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 CYP4A22Q5TCH4 519 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 TDRD10Q5VZ19 366 aaKnown RBP14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 MTSS1LQ765P7 747 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 PDZD4Q76G19 769 aaPredicted RBP14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 NPAS3Q8IXF0 933 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 SMYD4Q8IYR2 804 aaPredicted RBP14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 FLCNQ8NFG4 579 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 KBTBD7Q8WVZ9 684 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 NOTCH4Q99466 2003 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 PKMYT1Q99640 499 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 MKNK1Q9BUB5 465 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 DNAJC25Q9H1X3 360 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 ABCB6Q9NP58 842 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 ASAH2Q9NR71 780 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 DUSP12Q9UNI6 340 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 PCDHB5Q9Y5E4 795 aa14.62□□□□□ -0.07
CSNK1D-208ENST00000578501 DOCK8Q8NF50 2099 aa14.61□□□□□ -0.07
CSNK1D-208ENST00000578501 LMNAP02545 664 aaKnown RBP14.61□□□□□ -0.07
CSNK1D-208ENST00000578501 HAPLN1P10915 354 aaPredicted RBP14.61□□□□□ -0.07
CSNK1D-208ENST00000578501 AOC1P19801 751 aa14.61□□□□□ -0.07
CSNK1D-208ENST00000578501 PPP1R2P41236 205 aa14.61□□□□□ -0.07
CSNK1D-208ENST00000578501 VAMP7P51809 220 aa14.61□□□□□ -0.07
CSNK1D-208ENST00000578501 MYL6P60660 151 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms