RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	ZFHX4	Q86UP3	3567 aa		4.82	□□□□□ -1.64
PPP4R1-209	ENST00000578329	MYOF	Q9NZM1	2061 aa		4.82	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ZNF638	Q14966	1978 aa	Known RBP	4.82	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ABCA7	Q8IZY2	2146 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CFAP47	Q6ZTR5	3102 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CHURC1-FNTB	B4DL54	471 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	SPECC1L-ADORA2A	F8WAN1	911 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	HAX1	O00165	279 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	STK25	O00506	426 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CYB561D2	O14569	222 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CHAD	O15335	359 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	KLRC4	O43908	158 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	NOL4	O94818	638 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PRPF6	O94906	941 aa	Known RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	FAM13A	O94988	1023 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CST3	P01034	146 aa	Predicted RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	LRG1	P02750	347 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CPB1	P15086	417 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CYP2F1	P24903	491 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	GABRR2	P28476	465 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	UBA7	P41226	1012 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	NASP	P49321	788 aa	Predicted RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	FNTB	P49356	437 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	LIG4	P49917	911 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	MLLT6	P55198	1093 aa	Predicted RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PPP2R3A	Q06190	1150 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	STRN3	Q13033	797 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	TMEM132D	Q14C87	1099 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	SLC39A14	Q15043	492 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	LPAL2	Q16609	132 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	DDR2	Q16832	855 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	C1orf220	Q5T0J3	134 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	L1TD1	Q5T7N2	865 aa	Known RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	FAM171B	Q6P995	826 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ZNF852	Q6ZMS4	543 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PAQR9	Q6ZVX9	377 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PDZD4	Q76G19	769 aa	Predicted RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	BRAP	Q7Z569	592 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	LINC00301	Q8NCQ3	95 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	APPL2	Q8NEU8	664 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	FAM3C	Q92520	227 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	RUBCN	Q92622	972 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CYP2S1	Q96SQ9	504 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PYM1	Q9BRP8	204 aa	Known RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	BCO2	Q9BYV7	579 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	RAB34	Q9BZG1	259 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	XYLT2	Q9H1B5	865 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	LINC00597	Q9H2U6	94 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	SEMA4A	Q9H3S1	761 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ASB7	Q9H672	318 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	TASP1	Q9H6P5	420 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	BRD9	Q9H8M2	597 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	RPF1	Q9H9Y2	349 aa	Known RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ASAH2	Q9NR71	780 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	OLFML3	Q9NRN5	406 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	KBTBD4	Q9NVX7	518 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	GDAP2	Q9NXN4	497 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	DPP3	Q9NY33	737 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	LARS	Q9P2J5	1176 aa	Known RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	HSFX1	Q9UBD0	423 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	AGO2	Q9UKV8	859 aa	Known RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	MAFF	Q9ULX9	164 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	SMG5	Q9UPR3	1016 aa	Known RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	SMC3	Q9UQE7	1217 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	DERA	Q9Y315	318 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ZDHHC9	Q9Y397	364 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PCDHGA2	Q9Y5H1	932 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	STK24	Q9Y6E0	443 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	HELZ	P42694	1942 aa	Known RBP	4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	SPAG17	Q6Q759	2223 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ZFYVE26	Q68DK2	2539 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	IGF2R	P11717	2491 aa		4.81	□□□□□ -1.64
PPP4R1-209	ENST00000578329	C2orf78	A6NCI8	922 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	KPNA7	A9QM74	516 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ZNF197	O14709	1029 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	LAMTOR5	O43504	91 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	GREM1	O60565	184 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	OLFM2	O95897	454 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	EGF	P01133	1207 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ITGB3	P05106	788 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	POLR2B	P30876	1174 aa	Known RBP	4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	HOXA6	P31267	233 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ELF1	P32519	619 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	OPRD1	P41143	372 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PXN	P49023	591 aa	Predicted RBP	4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	SMTN	P53814	917 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PFKP	Q01813	784 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	POU5F1	Q01860	360 aa	Known RBP	4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CEBPZ	Q03701	1054 aa	Known RBP	4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	USP4	Q13107	963 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PLD1	Q13393	1074 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	GNL2	Q13823	731 aa	Known RBP	4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PON2	Q15165	354 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ZNF77	Q15935	545 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	TMEM196	Q5HYL7	178 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	GPR158	Q5T848	1215 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CYP4A22	Q5TCH4	519 aa		4.8	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ADAL	Q6DHV7	355 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms