RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 SMG5Q9UPR3 1016 aaKnown RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 SIT1Q9Y3P8 196 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 IPPQ9Y573 584 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 PCDHB2Q9Y5E7 798 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 AKAP13Q12802 2813 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 NCANO14594 1321 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 NBEAQ8NFP9 2946 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 CACNA1GO43497 2377 aa4.4□□□□□ -1.7
PTPRM-206ENST00000578093 TSC2P49815 1807 aa4.4□□□□□ -1.7
PTPRM-206ENST00000578093 KIAA1549LQ6ZVL6 1849 aa4.4□□□□□ -1.7
PTPRM-206ENST00000578093 FREM2Q5SZK8 3169 aa4.4□□□□□ -1.7
PTPRM-206ENST00000578093 ARL5CA6NH57 179 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 DDX3YO15523 660 aaKnown RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 ADAM12O43184 909 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 SLC37A4O43826 429 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 TSPAN1O60635 241 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 GAS7O60861 476 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 KINO60870 393 aaKnown RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 DTNBO60941 627 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 RECKO95980 971 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 CELA3AP09093 270 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 GSTP1P09211 210 aaKnown RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 LAMP2P13473 410 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 IGFBP6P24592 240 aaPredicted RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 MAOBP27338 520 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 HOXC13P31276 330 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 RAB27AP51159 221 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 JAK3P52333 1124 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 STARD6P59095 220 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 GPC5P78333 572 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 IRX6P78412 446 aaPredicted RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 DSG1Q02413 1049 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 NPY5RQ15761 445 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 MLF2Q15773 248 aaPredicted RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 NTRK3Q16288 839 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 LPAL2Q16609 132 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 XKR3Q5GH77 459 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 EXOSC6Q5RKV6 272 aaKnown RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 SCARA3Q6AZY7 606 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 FUT10Q6P4F1 479 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 LILRA6Q6PI73 481 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 ZC3H14Q6PJT7 736 aaKnown RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 PRSS55Q6UWB4 352 aaPredicted RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 ACAD11Q709F0 780 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 MIER3Q7Z3K6 550 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 GRASPQ7Z6J2 395 aaPredicted RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 CDR2LQ86X02 465 aaPredicted RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 TEX2Q8IWB9 1127 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 GSTCDQ8NEC7 633 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 ITFG1Q8TB96 612 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 ETNPPLQ8TBG4 499 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 TBCKQ8TEA7 893 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 HASPINQ8TF76 798 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 KCNB2Q92953 911 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 TMEM143Q96AN5 459 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 CPB2Q96IY4 423 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 CCDC136Q96JN2 1154 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 MBOAT7Q96N66 472 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 GAD1Q99259 594 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 RIT2Q99578 217 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 KXD1Q9BQD3 176 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 DDX23Q9BUQ8 820 aaKnown RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 RSRP1Q9BUV0 290 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 RUSC1Q9BVN2 902 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 APOL6Q9BWW8 343 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 RHOBTB2Q9BYZ6 727 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 NT5C3AQ9H0P0 336 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 CXCL16Q9H2A7 254 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 SEMA4AQ9H3S1 761 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 NXF3Q9H4D5 531 aaKnown RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 CYP4F12Q9HCS2 524 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 SLC2A4RGQ9NR83 387 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 CHST7Q9NS84 486 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 NRBP2Q9NSY0 501 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 SPATA6Q9NWH7 488 aaPredicted RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 HCFC1R1Q9NWW0 138 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 NCDNQ9UBB6 729 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 GGT7Q9UJ14 662 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 FBXW11Q9UKB1 542 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 NAP1L2Q9ULW6 460 aaPredicted RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 FAN1Q9Y2M0 1017 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 COL4A3BPQ9Y5P4 624 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 NUP210Q8TEM1 1887 aaPredicted RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 MYO16Q9Y6X6 1858 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 ZFYVE26Q68DK2 2539 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 CNTNAP2Q9UHC6 1331 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 CNOT1A5YKK6 2376 aaKnown RBP4.4□□□□□ -1.71
PTPRM-206ENST00000578093 F5P12259 2224 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 SPAG17Q6Q759 2223 aa4.4□□□□□ -1.71
PTPRM-206ENST00000578093 ANK1P16157 1881 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 LOC100289279A0A1B0GTE1 492 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 KANSL1LA0AUZ9 987 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 MEGF11A6BM72 1044 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 TM4SF5O14894 197 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 CCL16O15467 120 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 B4GALT5O43286 388 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 LAMTOR5O43504 91 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 ADAM11O75078 769 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 ALDH2P05091 517 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 EDN1P05305 212 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms