RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TMEM86AQ8N2M4 240 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 PDCL2Q8N4E4 241 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 TPCN2Q8NHX9 752 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 SENP8Q96LD8 212 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 AVENQ9NQS1 362 aaPredicted RBP19.71■□□□□ 0.75
PRKCA-203ENST00000578063 CTTNBP2NLQ9P2B4 639 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 CACNG4Q9UBN1 327 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 LRFN2Q9ULH4 789 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 GRID2IPA4D2P6 1211 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 PALMO75781 387 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 MTA2O94776 668 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 SSTR3P32745 418 aaPredicted RBP19.71■□□□□ 0.75
PRKCA-203ENST00000578063 DSC1Q08554 894 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 TUBB2AQ13885 445 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 LIN9Q5TKA1 542 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 CNKSR3Q6P9H4 555 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 DSTYKQ6XUX3 929 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 DEFB128Q7Z7B8 93 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 SYCE1Q8N0S2 351 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 C1orf131Q8NDD1 294 aaKnown RBP19.71■□□□□ 0.75
PRKCA-203ENST00000578063 C3orf58Q8NDZ4 430 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 TUBB2BQ9BVA1 445 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 L2HGDHQ9H9P8 463 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 ADAM22Q9P0K1 906 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 UVRAGQ9P2Y5 699 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 CNOT8Q9UFF9 292 aaKnown RBP19.71■□□□□ 0.75
PRKCA-203ENST00000578063 STXBP5LQ9Y2K9 1186 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 B3GAT3O94766 335 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 MMP8P22894 467 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 TCTN1Q2MV58 587 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 DCLRE1AQ6PJP8 1040 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 LCLAT1Q6UWP7 414 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 CRYBG2Q8N1P7 616 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 SPATA18Q8TC71 538 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 TNIP3Q96KP6 325 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 PAAF1Q9BRP4 392 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 OSGEPQ9NPF4 335 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 TBC1D13Q9NVG8 400 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 NME7Q9Y5B8 376 aa19.7■□□□□ 0.74
PRKCA-203ENST00000578063 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.69■□□□□ 0.74
PRKCA-203ENST00000578063 FAM170AA1A519 330 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 ARHGEF37A1IGU5 675 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 KIAA0355O15063 1070 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 MICAL2O94851 1124 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 ATP1A1P05023 1023 aaKnown RBP19.69■□□□□ 0.74
PRKCA-203ENST00000578063 CALB1P05937 261 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 PAPD7Q5XG87 772 aaKnown RBP19.69■□□□□ 0.74
PRKCA-203ENST00000578063 DENND1BQ6P3S1 775 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 ACOT1Q86TX2 421 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 NPAS4Q8IUM7 802 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 LRRC57Q8N9N7 239 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 MSANTD4Q8NCY6 345 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 C11orf70Q9BRQ4 267 aa19.69■□□□□ 0.74
PRKCA-203ENST00000578063 TDRD15B5MCY1 1934 aaKnown RBP19.69■□□□□ 0.74
PRKCA-203ENST00000578063 M0QYV0 167 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 GABRDO14764 452 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 ATMINO43313 823 aaPredicted RBP19.68■□□□□ 0.74
PRKCA-203ENST00000578063 ODC1P11926 461 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 LHX1P48742 406 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 RNASELQ05823 741 aaKnown RBP19.68■□□□□ 0.74
PRKCA-203ENST00000578063 IKBKEQ14164 716 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 WSCD1Q658N2 575 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 ARHGAP17Q68EM7 881 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 MMS22LQ6ZRQ5 1243 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 CRIPAKQ8N1N5 446 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 FAM193BQ96PV7 902 aaPredicted RBP19.68■□□□□ 0.74
PRKCA-203ENST00000578063 NUP85Q9BW27 656 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 TSPAN16Q9UKR8 245 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 COG5Q9UP83 839 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 TMEM189-UBE2V1I3L0A0 370 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 ENC1O14682 589 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 TIMP1P01033 207 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 AMPD2Q01433 879 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 PTP4A2Q12974 167 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 TIGD5Q53EQ6 642 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 SLFN11Q7Z7L1 901 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 OSTM1Q86WC4 334 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 COLGALT2Q8IYK4 626 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 WDTC1Q8N5D0 677 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 ZNF564Q8TBZ8 553 aaPredicted RBP19.68■□□□□ 0.74
PRKCA-203ENST00000578063 MRPL9Q9BYD2 267 aaKnown RBP19.68■□□□□ 0.74
PRKCA-203ENST00000578063 PRDM5Q9NQX1 630 aaPredicted RBP19.68■□□□□ 0.74
PRKCA-203ENST00000578063 DSEQ9UL01 958 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 MRFAP1Q9Y605 127 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 SCINQ9Y6U3 715 aa19.68■□□□□ 0.74
PRKCA-203ENST00000578063 SCN5AQ14524 2016 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 DDHD2O94830 711 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 RRM1P23921 792 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 IGFBP6P24592 240 aaPredicted RBP19.67■□□□□ 0.74
PRKCA-203ENST00000578063 C11orf63Q6NUN7 778 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 DAAM2Q86T65 1068 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 ERICH1Q86X53 443 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 ZNF280BQ86YH2 543 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 C12orf29Q8N999 325 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 RABGGTAQ92696 567 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 DPEP3Q9H4B8 488 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 MRPL47Q9HD33 250 aaKnown RBP19.67■□□□□ 0.74
PRKCA-203ENST00000578063 STRIP2Q9ULQ0 834 aa19.67■□□□□ 0.74
PRKCA-203ENST00000578063 M0QZQ0 153 aa19.66■□□□□ 0.74
PRKCA-203ENST00000578063 RIOK3O14730 519 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms