RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 BCS1LQ9Y276 419 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 INPP5FQ9Y2H2 1132 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 TSC22D4Q9Y3Q8 395 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 ATP9BO43861 1147 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 RALAP11233 206 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 P3H2Q8IVL5 708 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 INPP5DQ92835 1189 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 SMARCAL1Q9NZC9 954 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 QRICH2Q9H0J4 1663 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 MAGEB2O15479 319 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 CSTF3Q12996 717 aaKnown RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 EFHC1Q5JVL4 640 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 SLC26A11Q86WA9 606 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 BBS7Q8IWZ6 715 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 SP8Q8IXZ3 490 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 SLC30A5Q8TAD4 765 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 EPB41L4AQ9HCS5 686 aaPredicted RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 MARCOQ9UEW3 520 aaPredicted RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 TNS3Q68CZ2 1445 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 POLR1AO95602 1720 aaPredicted RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 CLPTM1O96005 669 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 GPD1P21695 349 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 TARSP26639 723 aaKnown RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 PRKAA2P54646 552 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 HERVK_113P62684 666 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 LRRC36Q1X8D7 754 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 FAM83EQ2M2I3 478 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 MICU2Q8IYU8 434 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 C1orf131Q8NDD1 294 aaKnown RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 ARHGEF1Q92888 912 aaKnown RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 KCNJ1P48048 391 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 PDK2Q15119 407 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 C6orf10Q5SRN2 563 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 BTBD8Q5XKL5 378 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 CLMNQ96JQ2 1002 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 CNDP1Q96KN2 507 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 CDC42EP4Q9H3Q1 356 aaKnown RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 AGPAT3Q9NRZ7 376 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 DYTNA2CJ06 578 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 LRRC10BA6NIK2 292 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 TOMM70O94826 608 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 OLFML2BQ68BL8 750 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 BNC2Q6ZN30 1099 aaPredicted RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 VPS37AQ8NEZ2 397 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 TMC2Q8TDI7 906 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 CPA5Q8WXQ8 436 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 KLHL4Q9C0H6 718 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 RAVER2Q9HCJ3 691 aaKnown RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 USP32Q8NFA0 1604 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 UBOX5O94941 541 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 DMC1Q14565 340 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 ZNF662Q6ZS27 426 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 MFN1Q8IWA4 741 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 MREGQ8N565 214 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 RSPH1Q8WYR4 309 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 NEUROG2Q9H2A3 272 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 DDX20Q9UHI6 824 aaKnown RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 SALL3Q9BXA9 1300 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 ASB14A6NK59 587 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 EIF4E1BA6NMX2 242 aaKnown RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 MYBP10242 640 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 PDHBP11177 359 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 PON1P27169 355 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 RGS4P49798 205 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 STAT5BP51692 787 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 R3HDM1Q15032 1099 aaKnown RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 HHIPL2Q6UWX4 724 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 CYGBQ8WWM9 190 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 SEC24DO94855 1032 aaPredicted RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 LSM8O95777 96 aaKnown RBP11.19□□□□□ -0.62
SEC22B-201ENST00000578049 CYP11B2P19099 503 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 PEX5P50542 639 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 KCNA1Q09470 495 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 ZFP1Q6P2D0 407 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 ATP8B4Q8TF62 1192 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 MAGED4Q96JG8 741 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 NT5C1AQ9BXI3 368 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 SORCS3Q9UPU3 1222 aa11.19□□□□□ -0.62
SEC22B-201ENST00000578049 RASA1P20936 1047 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 ATP6V1E1P36543 226 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 PPP4CP60510 307 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 KCNMA1Q12791 1236 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 PDAP1Q13442 181 aaKnown RBP11.18□□□□□ -0.62
SEC22B-201ENST00000578049 TWF2Q6IBS0 349 aaKnown RBP11.18□□□□□ -0.62
SEC22B-201ENST00000578049 SEPT8Q92599 483 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 FAM49AQ9H0Q0 323 aaPredicted RBP11.18□□□□□ -0.62
SEC22B-201ENST00000578049 UBA6A0AVT1 1052 aaPredicted RBP11.18□□□□□ -0.62
SEC22B-201ENST00000578049 MAP3K13O43283 966 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 ANXA9O76027 345 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 HIST1H2AGP0C0S8 130 aaPredicted RBP11.18□□□□□ -0.62
SEC22B-201ENST00000578049 HIST1H2ADP20671 130 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 C4BPBP20851 252 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 SARSP49591 514 aaKnown RBP11.18□□□□□ -0.62
SEC22B-201ENST00000578049 SLC34A1Q06495 639 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 ZNF34Q8IZ26 560 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 TUBGCP3Q96CW5 907 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 KIF12Q96FN5 646 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 HIST1H2AHQ96KK5 128 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms