RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 ABI2Q9NYB9 513 aaPredicted RBP16.1■□□□□ 0.17
RN7SL560P-201ENST00000577943 TFIP11Q9UBB9 837 aaKnown RBP16.1■□□□□ 0.17
RN7SL560P-201ENST00000577943 AGAP1Q9UPQ3 857 aa16.1■□□□□ 0.17
RN7SL560P-201ENST00000577943 PIAS3Q9Y6X2 628 aa16.1■□□□□ 0.17
RN7SL560P-201ENST00000577943 CHADO15335 359 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 EXTL3O43909 919 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 PPP6R2O75170 966 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 ATF6P18850 670 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 TSPY1Q01534 308 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 FZD5Q13467 585 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 STXBP4Q6ZWJ1 553 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 CSGALNACT2Q8N6G5 542 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 C1orf127Q8N9H9 656 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 GIPC2Q8TF65 315 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 RSPRY1Q96DX4 576 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 GVINP1Q7Z2Y8 2422 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 ANAPC1Q9H1A4 1944 aa16.09■□□□□ 0.17
RN7SL560P-201ENST00000577943 OTOGLQ3ZCN5 2332 aa16.08■□□□□ 0.17
RN7SL560P-201ENST00000577943 GREB1Q4ZG55 1949 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 RALGAPA1Q6GYQ0 2036 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 HUS1O60921 280 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 KRT19P08727 400 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 TMEM191BP0C7N4 346 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 HAPLN1P10915 354 aaPredicted RBP16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 CCNE1P24864 410 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 CDC25CP30307 473 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 CYP4F8P98187 520 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 AMPD3Q01432 767 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 BFSP1Q12934 665 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 GPD1LQ8N335 351 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 ATRIPQ8WXE1 791 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 MKNK1Q9BUB5 465 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 TNMDQ9H2S6 317 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 PDE11AQ9HCR9 933 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 ITGA11Q9UKX5 1188 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 R3HCC1Q9Y3T6 440 aaKnown RBP16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 PCDHB5Q9Y5E4 795 aa16.08■□□□□ 0.16
RN7SL560P-201ENST00000577943 DCHS1Q96JQ0 3298 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 ARNTLO00327 626 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 KIAA0391O15091 583 aaKnown RBP16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 YEATS4O95619 227 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 KPNA1P52294 538 aaPredicted RBP16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 ASIC1P78348 528 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 FCHO2Q0JRZ9 810 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 MTAPQ13126 283 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 TSSK4Q6SA08 328 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 PDCL2Q8N4E4 241 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 LRRC52Q8N7C0 313 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 DHX58Q96C10 678 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 ANKRD36BP1Q96IX9 119 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 FAM84AQ96KN4 292 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 PI4K2AQ9BTU6 479 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 MTMR12Q9C0I1 747 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 CHRDQ9H2X0 955 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 CUEDC2Q9H467 287 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 TASP1Q9H6P5 420 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 LMAN1LQ9HAT1 526 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 IL21Q9HBE4 155 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 KBTBD4Q9NVX7 518 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 L1RE1Q9UN81 338 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 PCDHGA2Q9Y5H1 932 aa16.07■□□□□ 0.16
RN7SL560P-201ENST00000577943 PTPRDP23468 1912 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 SLC38A8A6NNN8 435 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 CUTAO60888 179 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 PRPF40AO75400 957 aaKnown RBP16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 HSP90AA1P07900 732 aaKnown RBP16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 RBP5P82980 135 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 MYL7Q01449 175 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 E2F4Q16254 413 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 NFE2Q16621 373 aaPredicted RBP16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 ARHGAP29Q52LW3 1261 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 LMBRD2Q68DH5 695 aaPredicted RBP16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 C1orf228Q6PIY5 440 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 ZNF687Q8N1G0 1237 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 TMEM86AQ8N2M4 240 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 IQUBQ8NA54 791 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 GLIS3Q8NEA6 775 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 BPIFB1Q8TDL5 484 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 RUBCNQ92622 972 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 HPS3Q969F9 1004 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 SNX21Q969T3 373 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 MSANTD3Q96H12 275 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 ACBD6Q9BR61 282 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 TRIM9Q9C026 710 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 C8orf33Q9H7E9 229 aaPredicted RBP16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 PRMT8Q9NR22 394 aaPredicted RBP16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 TMLHEQ9NVH6 421 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 ZSCAN32Q9NX65 697 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 DDX43Q9NXZ2 648 aaKnown RBP16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 OBP2AQ9NY56 170 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
RN7SL560P-201ENST00000577943 ZNF233A6NK53 670 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 PRAMEF12O95522 483 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 ACAT1P24752 427 aaKnown RBP16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 SOX9P48436 509 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 GPR15P49685 360 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 MLLT6P55198 1093 aaPredicted RBP16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 PPP2R5DQ14738 602 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms