RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 ITIH6Q6UXX5 1313 aa13.57□□□□□ -0.24
MKS1-206ENST00000577824 EPHB6O15197 1021 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 PAPLNO95428 1278 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 CXCL14O95715 111 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 ADH1AP07327 375 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 WEE2P0C1S8 567 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 KLK7P49862 253 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 CLCN4P51793 760 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 MFAP3P55082 362 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 CDH8P55286 799 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 APBA1Q02410 837 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 SMARCB1Q12824 385 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 LRMPQ12912 555 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 KCNC3Q14003 757 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 RAB33AQ14088 237 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 INTS6LQ5JSJ4 861 aaKnown RBP13.56□□□□□ -0.24
MKS1-206ENST00000577824 THEM5Q8N1Q8 247 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 WHAMMQ8TF30 809 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 KAT5Q92993 513 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 GUCD1Q96NT3 240 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 KLHL5Q96PQ7 755 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 GPR88Q9GZN0 384 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.56□□□□□ -0.24
MKS1-206ENST00000577824 MAFFQ9ULX9 164 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 FHOD1Q9Y613 1164 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 CDY1Q9Y6F8 540 aa13.56□□□□□ -0.24
MKS1-206ENST00000577824 PLXNA3P51805 1871 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 WDR27A2RRH5 827 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 C2CD2LO14523 706 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 ADAM12O43184 909 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 ABLIM3O94929 683 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 LMO2P25791 158 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 GNL1P36915 607 aaPredicted RBP13.55□□□□□ -0.24
MKS1-206ENST00000577824 NDST1P52848 882 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 JAM2P57087 298 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 ROR1Q01973 937 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 GPR17Q13304 367 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 DUSP6Q16828 381 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 TPGS2Q68CL5 300 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 IQCEQ6IPM2 695 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 FAM171BQ6P995 826 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 GJB7Q6PEY0 223 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 LILRA6Q6PI73 481 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 Q7L0L9 218 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 RRAGAQ7L523 313 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 ADGRD2Q7Z7M1 963 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 PPFIBP1Q86W92 1011 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 CRYBG2Q8N1P7 616 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 DEFB123Q8N688 67 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 OR6B3Q8NGW1 331 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 C2orf15Q8WU43 125 aaKnown RBP13.55□□□□□ -0.24
MKS1-206ENST00000577824 PPP2R3CQ969Q6 453 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 IQCDQ96DY2 449 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 TNIP3Q96KP6 325 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 TWNKQ96RR1 684 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 GAS2L1Q99501 681 aaPredicted RBP13.55□□□□□ -0.24
MKS1-206ENST00000577824 SYT15Q9BQS2 421 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 SNX25Q9H3E2 840 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 UBE2TQ9NPD8 197 aaPredicted RBP13.55□□□□□ -0.24
MKS1-206ENST00000577824 MTMR10Q9NXD2 777 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 CEP72Q9P209 647 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 HSFX1Q9UBD0 423 aa13.55□□□□□ -0.24
MKS1-206ENST00000577824 A8MXQ7 604 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 F8VZ95 297 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 HCRTO43612 131 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 CLASP2O75122 1294 aaKnown RBP13.54□□□□□ -0.24
MKS1-206ENST00000577824 CLSTN1O94985 981 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 RPL17P18621 184 aaKnown RBP13.54□□□□□ -0.24
MKS1-206ENST00000577824 CD58P19256 250 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 TSPY1Q01534 308 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 MAPRE1Q15691 268 aaKnown RBP13.54□□□□□ -0.24
MKS1-206ENST00000577824 CFAP221Q4G0U5 840 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 B3GALNT2Q8NCR0 500 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 NEK11Q8NG66 645 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 MICAL1Q8TDZ2 1067 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 SLC22A17Q8WUG5 538 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 HDAC7Q8WUI4 952 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 MRFAP1L1Q96HT8 127 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 FUBP3Q96I24 572 aaKnown RBP eCLIP13.54□□□□□ -0.24
MKS1-206ENST00000577824 FAM161BQ96MY7 647 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 TMEM209Q96SK2 561 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 CDX2Q99626 313 aaPredicted RBP13.54□□□□□ -0.24
MKS1-206ENST00000577824 NT5C1AQ9BXI3 368 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 STK33Q9BYT3 514 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 EDEM3Q9BZQ6 932 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 ELOVL4Q9GZR5 314 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 DPEP3Q9H4B8 488 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 CRTAC1Q9NQ79 661 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
MKS1-206ENST00000577824 AFF4Q9UHB7 1163 aaKnown RBP13.54□□□□□ -0.24
MKS1-206ENST00000577824 FBXW11Q9UKB1 542 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 DNAJC12Q9UKB3 198 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 MYO6Q9UM54 1294 aa13.54□□□□□ -0.24
MKS1-206ENST00000577824 PTPRDP23468 1912 aa13.53□□□□□ -0.24
MKS1-206ENST00000577824 A0A1W2PQJ5 194 aa13.53□□□□□ -0.24
MKS1-206ENST00000577824 MTMR11A4FU01 709 aa13.53□□□□□ -0.24
MKS1-206ENST00000577824 VNN2O95498 520 aa13.53□□□□□ -0.24
MKS1-206ENST00000577824 PAEPP09466 180 aa13.53□□□□□ -0.24
MKS1-206ENST00000577824 CPB1P15086 417 aa13.53□□□□□ -0.24
MKS1-206ENST00000577824 ATF2P15336 505 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms