RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 CSRP2Q16527 193 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 TUSC1Q2TAM9 212 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 ZNF568Q3ZCX4 644 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 AASDHQ4L235 1098 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 TPGS2Q68CL5 300 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 TAS1R3Q7RTX0 852 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 LONP2Q86WA8 852 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 MAP4K3Q8IVH8 894 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 MFSD6LQ8IWD5 586 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 DIS3L2Q8IYB7 885 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 TCEAL8Q8IYN2 117 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 SPEM1Q8N4L4 309 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 NECAB1Q8N987 351 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 C12orf50Q8NA57 414 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 LEMD2Q8NC56 503 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 C3orf58Q8NDZ4 430 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 APPL2Q8NEU8 664 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 TTC8Q8TAM2 541 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 DDX1Q92499 740 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 E2F7Q96AV8 911 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 ACAP3Q96P50 834 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 POLR3CQ9BUI4 534 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 GPR88Q9GZN0 384 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 CCDC113Q9H0I3 377 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 TMEM60Q9H2L4 133 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 C8orf33Q9H7E9 229 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 TRPV5Q9NQA5 729 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 ASAH2Q9NR71 780 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 RBM12Q9NTZ6 932 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 FBXL5Q9UKA1 691 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 COL4A3Q01955 1670 aa7.5□□□□□ -1.21
SMARCE1-212ENST00000577721 SLC38A8A6NNN8 435 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 EPB41L2O43491 1005 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 FOXD2O60548 495 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 EDN1P05305 212 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 TDGF1P13385 188 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 FDPSP14324 419 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 RPA1P27694 616 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 RPL9P32969 192 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 CCT6AP40227 531 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 ALDH1A3P47895 512 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 SOX9P48436 509 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 PEX3P56589 373 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 SOX4Q06945 474 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 LRP8Q14114 963 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 ANKRD1Q15327 319 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 SAFBQ15424 915 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 ZNF174Q15697 407 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 ZNF280DQ6N043 979 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 HAUS6Q7Z4H7 955 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 CEP120Q8N960 986 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 KIFAP3Q92845 792 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 TNFRSF25Q93038 417 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 C18orf25Q96B23 403 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 MRPL4Q9BYD3 311 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 CDT1Q9H211 546 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 CEP72Q9P209 647 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 AFF4Q9UHB7 1163 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 ANGPTL2Q9UKU9 493 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 MAFFQ9ULX9 164 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 TNFSF13BQ9Y275 285 aa7.49□□□□□ -1.21
SMARCE1-212ENST00000577721 DMDP11532 3685 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 CHADO15335 359 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 MOSPD3O75425 235 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 MATR3P43243 847 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 EPHB3P54753 998 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 GUCY1B3Q02153 619 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 DUSP4Q13115 394 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 PLD1Q13393 1074 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 GNL2Q13823 731 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 MRPL58Q14197 206 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 CCDC6Q16204 474 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 DGKKQ5KSL6 1271 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 HAUS3Q68CZ6 603 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 C1orf228Q6PIY5 440 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 ALKAL1Q6UXT8 129 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 USP37Q86T82 979 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 SHKBP1Q8TBC3 707 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 MSANTD3Q96H12 275 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 SUSD3Q96L08 255 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 ZMAT2Q96NC0 199 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 TBC1D32Q96NH3 1257 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 PGLYRP2Q96PD5 576 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 ACO2Q99798 780 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 TARS2Q9BW92 718 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 GRIP2Q9C0E4 1043 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 ARRDC1-AS1Q9H2J1 176 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 BHMT2Q9H2M3 363 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 ATXN3LQ9H3M9 355 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 TRPV4Q9HBA0 871 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 KMT5AQ9NQR1 393 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 TPSG1Q9NRR2 321 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 ATXN7L1Q9ULK2 861 aaPredicted RBP7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 KIAA1024Q9UPX6 916 aa7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 TIMM13Q9Y5L4 95 aaPredicted RBP7.48□□□□□ -1.21
SMARCE1-212ENST00000577721 SPECC1L-ADORA2AF8WAN1 911 aa7.47□□□□□ -1.21
SMARCE1-212ENST00000577721 JAK2O60674 1132 aa7.47□□□□□ -1.21
SMARCE1-212ENST00000577721 OR4Q2P0C623 313 aa7.47□□□□□ -1.21
SMARCE1-212ENST00000577721 OR52Z1P0C646 297 aa7.47□□□□□ -1.21
SMARCE1-212ENST00000577721 CCDC192P0DO97 292 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms