RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 DNA2P51530 1060 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 GJA9P57773 515 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 SPRED3Q2MJR0 410 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 DNAJB3Q8WWF6 145 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 TBC1D31Q96DN5 1066 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 STAMBPL1Q96FJ0 436 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 HES6Q96HZ4 224 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 MS4A14Q96JA4 679 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 PBKQ96KB5 322 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 OSMRQ99650 979 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 GCOM2Q9BZD3 368 aaPredicted RBP14.64□□□□□ -0.07
RNF43-202ENST00000577625 XYLT2Q9H1B5 865 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 AMFRQ9UKV5 643 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 KCNK3O14649 394 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 MTA2O94776 668 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 HOXA11P31270 313 aaPredicted RBP14.63□□□□□ -0.07
RNF43-202ENST00000577625 TRIM32Q13049 653 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 KYAT1Q16773 422 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 CLEC16AQ2KHT3 1053 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 SGSM1Q2NKQ1 1148 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 SLC10A6Q3KNW5 377 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 SMYD5Q6GMV2 418 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 JADE1Q6IE81 842 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 ACAD10Q6JQN1 1059 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 TMEM270Q6UE05 265 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 NIF3L1Q9GZT8 377 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 SMARCAL1Q9NZC9 954 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 CTTNBP2NLQ9P2B4 639 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 BAIAP2L1Q9UHR4 511 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 SIX4Q9UIU6 781 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 GTF3C4Q9UKN8 822 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 PCDHB4Q9Y5E5 795 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 HTTP42858 3142 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 C17orf102A2RUQ5 167 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 C5orf60A6NFR6 353 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 UNGP13051 313 aaPredicted RBP14.63□□□□□ -0.07
RNF43-202ENST00000577625 DARSP14868 501 aaKnown RBP14.63□□□□□ -0.07
RNF43-202ENST00000577625 TRPC3Q13507 836 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 CACNA2D3Q8IZS8 1091 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 TMEM130Q8N3G9 435 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 MREGQ8N565 214 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 C1orf127Q8N9H9 656 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 RBBP8NLQ8NC74 664 aaPredicted RBP14.63□□□□□ -0.07
RNF43-202ENST00000577625 CAPNS2Q96L46 248 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 ADPGKQ9BRR6 497 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 UPF3AQ9H1J1 476 aaKnown RBP14.63□□□□□ -0.07
RNF43-202ENST00000577625 ASB7Q9H672 318 aa14.63□□□□□ -0.07
RNF43-202ENST00000577625 PPANQ9NQ55 473 aaKnown RBP14.63□□□□□ -0.07
RNF43-202ENST00000577625 SCN1AP35498 2009 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 MROH7Q68CQ1 1323 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 DNAH12Q6ZR08 3092 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 RTN3O95197 1032 aaPredicted RBP14.62□□□□□ -0.07
RNF43-202ENST00000577625 ANP32DO95626 131 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 CYP1A2P05177 515 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 ZNF132P52740 706 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 ZNF699Q32M78 642 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 C11orf63Q6NUN7 778 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 CATSPER4Q7RTX7 472 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 MFN1Q8IWA4 741 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 CXorf38Q8TB03 319 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 TMEM40Q8WWA1 233 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 SEC16BQ96JE7 1060 aa14.62□□□□□ -0.07
RNF43-202ENST00000577625 TRAPPC3O43617 180 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 GRM5P41594 1212 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 SNX1Q13596 522 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 DCAF4L1Q3SXM0 396 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 GNASQ5JWF2 1037 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 SLC30A9Q6PML9 568 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 C7orf31Q8N865 590 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 ACTRT1Q8TDG2 376 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 HINFPQ9BQA5 517 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 RBM12Q9NTZ6 932 aaKnown RBP14.61□□□□□ -0.07
RNF43-202ENST00000577625 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.61□□□□□ -0.07
RNF43-202ENST00000577625 ATMINO43313 823 aaPredicted RBP14.61□□□□□ -0.07
RNF43-202ENST00000577625 KPNA6O60684 536 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 NPTXRO95502 500 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 PGK1P00558 417 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 CYP1A1P04798 512 aaPredicted RBP14.61□□□□□ -0.07
RNF43-202ENST00000577625 EIF4BP23588 611 aaKnown RBP14.61□□□□□ -0.07
RNF43-202ENST00000577625 GNA15P30679 374 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 ASPAP45381 313 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 CACNB2Q08289 660 aaPredicted RBP14.61□□□□□ -0.07
RNF43-202ENST00000577625 SNX17Q15036 470 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 PCBP1Q15365 356 aaKnown RBP eCLIP14.61□□□□□ -0.074e-6■■■■■ 41.5
RNF43-202ENST00000577625 PTPROQ16827 1216 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 TBC1D25Q3MII6 688 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 THEMIS2Q5TEJ8 643 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 TRIM72Q6ZMU5 477 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 CCT6BQ92526 530 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 ZNF653Q96CK0 615 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 ACAP3Q96P50 834 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 NOP53Q9NZM5 478 aaKnown RBP14.61□□□□□ -0.07
RNF43-202ENST00000577625 UVRAGQ9P2Y5 699 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 THSD7BQ9C0I4 1608 aa14.61□□□□□ -0.07
RNF43-202ENST00000577625 SEPT4O43236 478 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 SLC7A5Q01650 507 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 SP3Q02447 781 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 CENPCQ03188 943 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 DEFB115Q30KQ5 88 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 HIBCHQ6NVY1 386 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms