RNA–Protein interactions for RNA: ENST00000576872.1

CAMTA2-216, Transcript of calmodulin binding transcription activator 2, human

TSL 2

Gene CAMTA2, Length 985 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA2-216	ENST00000576872	VRTN	Q9H8Y1	702 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TMLHE	Q9NVH6	421 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	CEP72	Q9P209	647 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	SLC27A5	Q9Y2P5	690 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	RHO	P08100	348 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ALAD	P13716	330 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PTPN2	P17706	415 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	WARS	P23381	471 aa	Known RBP	18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	CDR1	P51861	262 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TNNC1	P63316	161 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PPP3CA	Q08209	521 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	SMARCB1	Q12824	385 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ZNF699	Q32M78	642 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	INTS6L	Q5JSJ4	861 aa	Known RBP	18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	KLHL10	Q6JEL2	608 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TRIML1	Q8N9V2	468 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ITFG1	Q8TB96	612 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	C2orf15	Q8WU43	125 aa	Known RBP	18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PKMYT1	Q99640	499 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	MRPL45	Q9BRJ2	306 aa	Known RBP	18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	CLSTN2	Q9H4D0	955 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	HSFX1	Q9UBD0	423 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	NXF1	Q9UBU9	619 aa	Known RBP	18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	LIMD1	Q9UGP4	676 aa		18.77	■□□□□ 0.6
CAMTA2-216	ENST00000576872	SLC16A3	O15427	465 aa	Known RBP	18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	TACC1	O75410	805 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	SOAT2	O75908	522 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	PCSK1	P29120	753 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	GCLM	P48507	274 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	PLD1	Q13393	1074 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	PTPN21	Q16825	1174 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ELMOD1	Q8N336	334 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	SPPL2B	Q8TCT7	592 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	NELFB	Q8WX92	580 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ELMO3	Q96BJ8	720 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	CORO1B	Q9BR76	489 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	DNAJC25	Q9H1X3	360 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	AVEN	Q9NQS1	362 aa	Predicted RBP	18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ABI2	Q9NYB9	513 aa	Predicted RBP	18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	EPS15L1	Q9UBC2	864 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	CTNND2	Q9UQB3	1225 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	MYO10	Q9HD67	2058 aa		18.76	■□□□□ 0.59
CAMTA2-216	ENST00000576872	HLA-DRA	P01903	254 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ASGR2	P07307	311 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	FAM163B	P0C2L3	166 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	LMO2	P25791	158 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ALDH1A3	P47895	512 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	TUFM	P49411	452 aa	Known RBP	18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	NFE2	Q16621	373 aa	Predicted RBP	18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	CCDC142	Q17RM4	750 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	SLC5A9	Q2M3M2	681 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	MGAT5B	Q3V5L5	792 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ZNF667	Q5HYK9	610 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	IQCE	Q6IPM2	695 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	TTI2	Q6NXR4	508 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	HS6ST3	Q8IZP7	471 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ZNF512	Q96ME7	567 aa	Predicted RBP	18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	SEPT5	Q99719	369 aa	Predicted RBP	18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	DUSP9	Q99956	384 aa	Known RBP	18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	SYT15	Q9BQS2	421 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	SMYD3	Q9H7B4	428 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	MMRN2	Q9H8L6	949 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	CDH7	Q9ULB5	785 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	NME7	Q9Y5B8	376 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	PCDHB5	Q9Y5E4	795 aa		18.75	■□□□□ 0.59
CAMTA2-216	ENST00000576872	MYBPHL	A2RUH7	354 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	CLSTN1	O94985	981 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	HAPLN1	P10915	354 aa	Predicted RBP	18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	LAMP2	P13473	410 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	GTF2H1	P32780	548 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	PIK3CA	P42336	1068 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	EPHB3	P54753	998 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	SGSM1	Q2NKQ1	1148 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	PRSS36	Q5K4E3	855 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	FOXR2	Q6PJQ5	311 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	TAS1R2	Q8TE23	839 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	TAF4B	Q92750	862 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	FGF13	Q92913	245 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	CEP63	Q96MT8	703 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	SNX25	Q9H3E2	840 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	TMEM8A	Q9HCN3	771 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	GTF3C4	Q9UKN8	822 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	CDH9	Q9ULB4	789 aa		18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	MRPS23	Q9Y3D9	190 aa	Known RBP	18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	18.74	■□□□□ 0.59
CAMTA2-216	ENST00000576872	BICDL2	A1A5D9	508 aa		18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ATP2C2	O75185	946 aa		18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ASS1	P00966	412 aa	Known RBP	18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	PDGFRB	P09619	1106 aa		18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ATF6	P18850	670 aa		18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	GNL1	P36915	607 aa	Predicted RBP	18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	CCR2	P41597	374 aa		18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	EPHA5	P54756	1037 aa		18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	PSMC1	P62191	440 aa	Known RBP	18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	ZXDA	P98168	799 aa		18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	PAK1	Q13153	545 aa		18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	KRT39	Q6A163	491 aa		18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	SPOPL	Q6IQ16	392 aa		18.73	■□□□□ 0.59
CAMTA2-216	ENST00000576872	FAM171B	Q6P995	826 aa		18.73	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms