RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SIM2Q14190 667 aaPredicted RBP11.28□□□□□ -0.6
TVP23B-208ENST00000575261 SF3A1Q15459 793 aaKnown RBP11.28□□□□□ -0.6
TVP23B-208ENST00000575261 SV2CQ496J9 727 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
TVP23B-208ENST00000575261 TXNDC11Q6PKC3 985 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 Q6ZS52 159 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.28□□□□□ -0.6
TVP23B-208ENST00000575261 LONP2Q86WA8 852 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 NT5DC4Q86YG4 428 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 POMGNT1Q8WZA1 660 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 ZNF560Q96MR9 790 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 LRRC3BQ96PB8 259 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 RTKNQ9BST9 563 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 CCSER1Q9C0I3 900 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 PARD6AQ9NPB6 346 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 RBM12Q9NTZ6 932 aaKnown RBP11.28□□□□□ -0.6
TVP23B-208ENST00000575261 DPP3Q9NY33 737 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 ABI2Q9NYB9 513 aaPredicted RBP11.28□□□□□ -0.6
TVP23B-208ENST00000575261 STK17AQ9UEE5 414 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 STYXL1Q9Y6J8 313 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 LAMA1P25391 3075 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 CHURC1-FNTBB4DL54 471 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 K7ESF4 209 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 PPP1R37O75864 691 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 DDIT3P35638 169 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 PNPLA4P41247 253 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 FNTBP49356 437 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 ATXN1P54253 815 aaKnown RBP11.27□□□□□ -0.61
TVP23B-208ENST00000575261 PON2Q15165 354 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 WDR44Q5JSH3 913 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 WSCD1Q658N2 575 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 SFR1Q86XK3 245 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 GPIHBP1Q8IV16 184 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 EFCAB13Q8IY85 973 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 DCP1BQ8IZD4 617 aaKnown RBP11.27□□□□□ -0.61
TVP23B-208ENST00000575261 SYNPOQ8N3V7 929 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 TTC8Q8TAM2 541 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 THG1LQ9NWX6 298 aaKnown RBP11.27□□□□□ -0.61
TVP23B-208ENST00000575261 SEL1LQ9UBV2 794 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 CCDC39Q9UFE4 941 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 OBSL1O75147 1896 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 ACACBO00763 2458 aa11.27□□□□□ -0.61
TVP23B-208ENST00000575261 KPNA7A9QM74 516 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 HAPLN1P10915 354 aaPredicted RBP11.26□□□□□ -0.61
TVP23B-208ENST00000575261 DDX6P26196 483 aaKnown RBP eCLIP11.26□□□□□ -0.61
TVP23B-208ENST00000575261 AVPR1AP37288 418 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 TXLNAP40222 546 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 TSPY1Q01534 308 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 TNK2Q07912 1038 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 DMWDQ09019 674 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 BFSP1Q12934 665 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 POSTNQ15063 836 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 PTPAQ15257 358 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 NFE2Q16621 373 aaPredicted RBP11.26□□□□□ -0.61
TVP23B-208ENST00000575261 ITPRIPL2Q3MIP1 535 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 DYMQ7RTS9 669 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 ZNF720Q7Z2F6 126 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 CMTM8Q8IZV2 173 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 NETO1Q8TDF5 533 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 GIPC2Q8TF65 315 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 MRPL44Q9H9J2 332 aaKnown RBP11.26□□□□□ -0.61
TVP23B-208ENST00000575261 KIF9Q9HAQ2 790 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 EXOC7Q9UPT5 735 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 PCDHB5Q9Y5E4 795 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 DENND4CQ5VZ89 1909 aa11.26□□□□□ -0.61
TVP23B-208ENST00000575261 TPRP12270 2363 aaKnown RBP11.26□□□□□ -0.61
TVP23B-208ENST00000575261 VPS37CA5D8V6 355 aaPredicted RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 HRO43593 1189 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 FOXD2O60548 495 aaPredicted RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 CSH1P0DML2 217 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 CSH2P0DML3 217 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 GAP43P17677 238 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 ADSSP30520 456 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 POLR2BP30876 1174 aaKnown RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 HOXA6P31267 233 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 CDR1P51861 262 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 NLRP12P59046 1061 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 TFAMQ00059 246 aaKnown RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 L1TD1Q5T7N2 865 aaKnown RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 HEATR6Q6AI08 1181 aaKnown RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 CRELD2Q6UXH1 353 aaPredicted RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 PRR23CQ6ZRP0 262 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 LRRTM3Q86VH5 581 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 BRSK2Q8IWQ3 736 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 MAB21L3Q8N8X9 362 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 LEO1Q8WVC0 666 aaPredicted RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 MRPS31Q92665 395 aaKnown RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 EPSTI1Q96J88 318 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 SLC46A2Q9BY10 475 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 SMG9Q9H0W8 520 aaKnown RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 IKZF4Q9H2S9 585 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 SEMA4GQ9NTN9 838 aa11.25□□□□□ -0.61
TVP23B-208ENST00000575261 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.25□□□□□ -0.61
TVP23B-208ENST00000575261 CHD8Q9HCK8 2581 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 DCDC2BA2VCK2 349 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 SOBPA7XYQ1 873 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 GCNT3O95395 438 aa11.24□□□□□ -0.61
TVP23B-208ENST00000575261 LDHAP00338 332 aaKnown RBP11.24□□□□□ -0.61
TVP23B-208ENST00000575261 ITGB3P05106 788 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms