RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 NXF1Q9UBU9 619 aaKnown RBP22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 GABRDO14764 452 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 STAU1O95793 577 aaKnown RBP22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 CD44P16070 742 aaKnown RBP22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 CCNE1P24864 410 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 FKBP3Q00688 224 aaKnown RBP22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 PTPN21Q16825 1174 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 MGAT5BQ3V5L5 792 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 ZACNQ401N2 412 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 INTS6LQ5JSJ4 861 aaKnown RBP22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 C1orf220Q5T0J3 134 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 SV2AQ7L0J3 742 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 LIMS2Q7Z4I7 341 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 ITFG1Q8TB96 612 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 SPPL2BQ8TCT7 592 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 KBTBD7Q8WVZ9 684 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 DHTKD1Q96HY7 919 aaPredicted RBP22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 C1QTNF1Q9BXJ1 281 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 MMRN2Q9H8L6 949 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 CEP72Q9P209 647 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 EPS15L1Q9UBC2 864 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 HSFX1Q9UBD0 423 aa22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 MRPS23Q9Y3D9 190 aaKnown RBP22.19■■□□□ 1.14
HCFC1R1-208ENST00000575214 HCRTO43612 131 aa22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 SOAT2O75908 522 aa22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 VNN1O95497 513 aa22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 BMP6P22004 513 aa22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 WARSP23381 471 aaKnown RBP22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 PIK3CAP42336 1068 aa22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 TUFMP49411 452 aaKnown RBP22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 EPHB3P54753 998 aa22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 NFE2Q16621 373 aaPredicted RBP22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 TMLHEQ9NVH6 421 aa22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 KIAA1468Q9P260 1216 aa22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 CDH7Q9ULB5 785 aa22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 PCDHB5Q9Y5E4 795 aa22.18■■□□□ 1.14
HCFC1R1-208ENST00000575214 LAMP2P13473 410 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 GCLMP48507 274 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 ENPEPQ07075 957 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 SLC5A9Q2M3M2 681 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 ZNF667Q5HYK9 610 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 PDZD4Q76G19 769 aaPredicted RBP22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 ING5Q8WYH8 240 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 FGF13Q92913 245 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 SYT15Q9BQS2 421 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 MRPL45Q9BRJ2 306 aaKnown RBP22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 SNX25Q9H3E2 840 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 VRTNQ9H8Y1 702 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 AVENQ9NQS1 362 aaPredicted RBP22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 ASAH2Q9NR71 780 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 SORCS3Q9UPU3 1222 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 CTNND2Q9UQB3 1225 aa22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 ZFP37Q9Y6Q3 630 aaPredicted RBP22.17■■□□□ 1.14
HCFC1R1-208ENST00000575214 FAM86C2PA6NEL3 165 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 SLC16A3O15427 465 aaKnown RBP22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 TACC1O75410 805 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 HLA-DRAP01903 254 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 LMO2P25791 158 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 ZXDAP98168 799 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 PPP3CAQ08209 521 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 MTMR3Q13615 1198 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 CYP4A22Q5TCH4 519 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 SCARA5Q6ZMJ2 495 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 ZC3H3Q8IXZ2 948 aaKnown RBP22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 HS6ST3Q8IZP7 471 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 TRIML1Q8N9V2 468 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 OR6B3Q8NGW1 331 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 FAM200AQ8TCP9 573 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 NELFBQ8WX92 580 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 EDAQ92838 391 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 ELMO3Q96BJ8 720 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 PI4K2AQ9BTU6 479 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 DNAJC25Q9H1X3 360 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 KCNK12Q9HB15 430 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 GTF3C4Q9UKN8 822 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 CDH9Q9ULB4 789 aa22.16■■□□□ 1.14
HCFC1R1-208ENST00000575214 PPP1R3GB7ZBB8 358 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 ZNF197O14709 1029 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 PDGFRBP09619 1106 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 HAPLN1P10915 354 aaPredicted RBP22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 MYL4P12829 197 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 GNL1P36915 607 aaPredicted RBP22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 PSMC1P62191 440 aaKnown RBP22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 CCDC142Q17RM4 750 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 SGSM1Q2NKQ1 1148 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 TCERG1LQ5VWI1 586 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 IMPG2Q9BZV3 1241 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 CLSTN2Q9H4D0 955 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 SMYD3Q9H7B4 428 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 TMEM8AQ9HCN3 771 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 LMBRD1Q9NUN5 540 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 IGSF9Q9P2J2 1179 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 DOCK6Q96HP0 2047 aa22.15■■□□□ 1.14
HCFC1R1-208ENST00000575214 BICDL2A1A5D9 508 aa22.14■■□□□ 1.14
HCFC1R1-208ENST00000575214 MYBPHLA2RUH7 354 aa22.14■■□□□ 1.14
HCFC1R1-208ENST00000575214 FAM163BP0C2L3 166 aa22.14■■□□□ 1.14
HCFC1R1-208ENST00000575214 P4HA1P13674 534 aa22.14■■□□□ 1.14
HCFC1R1-208ENST00000575214 CEBPBP17676 345 aa22.14■■□□□ 1.14
HCFC1R1-208ENST00000575214 VEPH1Q14D04 833 aa22.14■■□□□ 1.14
HCFC1R1-208ENST00000575214 DCAF17Q5H9S7 520 aaPredicted RBP22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms