RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 ASB16Q96NS5 453 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 PKMYT1Q99640 499 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 ACBD6Q9BR61 282 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 ZNF334Q9HCZ1 680 aaPredicted RBP21.18■□□□□ 0.98
SCARF1-208ENST00000574545 ARHGEF3Q9NR81 526 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 DMAC2Q9NW81 257 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 SNX9Q9Y5X1 595 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 TULP1O00294 542 aaPredicted RBP21.17■□□□□ 0.98
SCARF1-208ENST00000574545 HUS1O60921 280 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 CST3P01034 146 aaPredicted RBP21.17■□□□□ 0.98
SCARF1-208ENST00000574545 ATF6P18850 670 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 STARD6P59095 220 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 BFSP1Q12934 665 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 SOWAHAQ2M3V2 549 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 GAREM2Q75VX8 874 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 DPH6Q7L8W6 267 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 TRAPPC11Q7Z392 1133 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 DCP1BQ8IZD4 617 aaKnown RBP21.17■□□□□ 0.98
SCARF1-208ENST00000574545 ZNF516Q92618 1163 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 KCTD10Q9H3F6 313 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 GOLPH3LQ9H4A5 285 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 TRPV4Q9HBA0 871 aa21.17■□□□□ 0.98
SCARF1-208ENST00000574545 TNNC2P02585 160 aa21.16■□□□□ 0.98
SCARF1-208ENST00000574545 HAPLN1P10915 354 aaPredicted RBP21.16■□□□□ 0.98
SCARF1-208ENST00000574545 CDR1P51861 262 aa21.16■□□□□ 0.98
SCARF1-208ENST00000574545 TEAD2Q15562 447 aa21.16■□□□□ 0.98
SCARF1-208ENST00000574545 PLEKHO2Q8TD55 490 aa21.16■□□□□ 0.98
SCARF1-208ENST00000574545 SMARCD2Q92925 531 aa21.16■□□□□ 0.98
SCARF1-208ENST00000574545 HPDLQ96IR7 371 aa21.16■□□□□ 0.98
SCARF1-208ENST00000574545 CGRRF1Q99675 332 aa21.16■□□□□ 0.98
SCARF1-208ENST00000574545 MKNK1Q9BUB5 465 aa21.16■□□□□ 0.98
SCARF1-208ENST00000574545 DDX23Q9BUQ8 820 aaKnown RBP21.16■□□□□ 0.98
SCARF1-208ENST00000574545 TBC1D17Q9HA65 648 aa21.16■□□□□ 0.98
SCARF1-208ENST00000574545 GDPD2Q9HCC8 539 aa21.16■□□□□ 0.98
SCARF1-208ENST00000574545 DDX43Q9NXZ2 648 aaKnown RBP21.16■□□□□ 0.98
SCARF1-208ENST00000574545 A0A1W2PRU2 124 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 PRR29P0C7W0 189 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 BECN1Q14457 450 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 MGAT5BQ3V5L5 792 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 SLC44A4Q53GD3 710 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 KRBA2Q6ZNG9 492 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 SLC9A9Q8IVB4 645 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 FSIP1Q8NA03 581 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 GOLGA5Q8TBA6 731 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 KBTBD7Q8WVZ9 684 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 PHOX2BQ99453 314 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 LPIN3Q9BQK8 851 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 GPR88Q9GZN0 384 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 IL21Q9HBE4 155 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 ZFP14Q9HCL3 533 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 EXOC1Q9NV70 894 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 USP34Q70CQ2 3546 aa21.15■□□□□ 0.98
SCARF1-208ENST00000574545 NCANO14594 1321 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 HCRTO43612 131 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 PRPF40AO75400 957 aaKnown RBP21.14■□□□□ 0.97
SCARF1-208ENST00000574545 RHOBTB3O94955 611 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 RPN1P04843 607 aaKnown RBP21.14■□□□□ 0.97
SCARF1-208ENST00000574545 DLATP10515 647 aaKnown RBP21.14■□□□□ 0.97
SCARF1-208ENST00000574545 TNNI1P19237 187 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 LHX1P48742 406 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 MYL7Q01449 175 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 TSPY1Q01534 308 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 DPYDQ12882 1025 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 MYO1EQ12965 1108 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 SNW1Q13573 536 aaKnown RBP21.14■□□□□ 0.97
SCARF1-208ENST00000574545 INTS6LQ5JSJ4 861 aaKnown RBP21.14■□□□□ 0.97
SCARF1-208ENST00000574545 ITIH5Q86UX2 942 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 CCDC127Q96BQ5 260 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 FNBP1Q96RU3 617 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 SEPT5Q99719 369 aaPredicted RBP21.14■□□□□ 0.97
SCARF1-208ENST00000574545 DLGAP2Q9P1A6 1054 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 PCDHB5Q9Y5E4 795 aa21.14■□□□□ 0.97
SCARF1-208ENST00000574545 SHISA7A6NL88 538 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 PDXKO00764 312 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 EXOC3O60645 756 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 ZNF202O95125 648 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 ACAT1P24752 427 aaKnown RBP21.13■□□□□ 0.97
SCARF1-208ENST00000574545 VIPR2P41587 438 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 CLDN10P78369 228 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 PFKPQ01813 784 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 NFE2Q16621 373 aaPredicted RBP21.13■□□□□ 0.97
SCARF1-208ENST00000574545 STXBP5Q5T5C0 1151 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 FAM171BQ6P995 826 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 VITQ6UXI7 678 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 CCDC105Q8IYK2 499 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 ADGRF2Q8IZF7 708 aa21.13■□□□□ 0.97
SCARF1-208ENST00000574545 ZSCAN18Q8TBC5 510 aaPredicted RBP21.13■□□□□ 0.97
SCARF1-208ENST00000574545 ABI2Q9NYB9 513 aaPredicted RBP21.13■□□□□ 0.97
SCARF1-208ENST00000574545 COL4A3Q01955 1670 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 F5P12259 2224 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 H0Y858 1186 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 STAU1O95793 577 aaKnown RBP21.12■□□□□ 0.97
SCARF1-208ENST00000574545 HMGA1P17096 107 aaKnown RBP21.12■□□□□ 0.97
SCARF1-208ENST00000574545 LMO2P25791 158 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 GABRR2P28476 465 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 CASP4P49662 377 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 PRKCQQ04759 706 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 MLF2Q15773 248 aaPredicted RBP21.12■□□□□ 0.97
SCARF1-208ENST00000574545 CCDC142Q17RM4 750 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 DTWD2Q8NBA8 298 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms