RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 STK10O94804 968 aaKnown RBP15.15■□□□□ 0.02
SMG6-215ENST00000574501 PGM3O95394 542 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 KRT5P13647 590 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 MFAP3P55082 362 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 ACTR3P61158 418 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 AP3B2Q13367 1082 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 DDB1Q16531 1140 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 CLEC16AQ2KHT3 1053 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 ATP13A4Q4VNC1 1196 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 SFT2D3Q587I9 215 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 C6orf163Q5TEZ5 329 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 LPCAT4Q643R3 524 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 SLC9A9Q8IVB4 645 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 TAB3Q8N5C8 712 aaPredicted RBP15.15■□□□□ 0.02
SMG6-215ENST00000574501 BANPQ8N9N5 519 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 PYDC1Q8WXC3 89 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 VTI1AQ96AJ9 217 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 FAM111AQ96PZ2 611 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 PAFAH2Q99487 392 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 CCDC28BQ9BUN5 200 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 MIS12Q9H081 205 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 GLT8D2Q9H1C3 349 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 ITGA2BP08514 1039 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 MAP7Q14244 749 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 PRKD1Q15139 912 aaPredicted RBP15.15■□□□□ 0.02
SMG6-215ENST00000574501 EFHC2Q5JST6 749 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 SLC10A5Q5PT55 438 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 ACAD11Q709F0 780 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 CENPUQ71F23 418 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 SMC1BQ8NDV3 1235 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 OR6Y1Q8NGX8 325 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 CCDC127Q96BQ5 260 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 LENG1Q96BZ8 264 aaPredicted RBP15.15■□□□□ 0.02
SMG6-215ENST00000574501 FOXP3Q9BZS1 431 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 PICK1Q9NRD5 415 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 PLIN4Q96Q06 1357 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 CLUHO75153 1309 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 LPXNO60711 386 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 TM7SF2O76062 418 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 IFNB1P01574 187 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 ATF7P17544 494 aaPredicted RBP15.14■□□□□ 0.01
SMG6-215ENST00000574501 MAP3K10Q02779 954 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 GABPAQ06546 454 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 MED21Q13503 144 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 TRMT5Q32P41 509 aaKnown RBP15.14■□□□□ 0.01
SMG6-215ENST00000574501 MCOLN2Q8IZK6 566 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 GSTCDQ8NEC7 633 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 MTBPQ96DY7 904 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 AGBL1Q96MI9 1066 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 PPARGC1AQ9UBK2 798 aaKnown RBP15.14■□□□□ 0.01
SMG6-215ENST00000574501 PLA2G4CQ9UP65 541 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 ZNFX1Q9P2E3 1918 aaKnown RBP15.14■□□□□ 0.01
SMG6-215ENST00000574501 UBE4BO95155 1302 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 TTC36A6NLP5 189 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 TM9SF1O15321 606 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 LIASO43766 372 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 ATP6V1G1O75348 118 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 GLRA2P23416 452 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 SSTR3P32745 418 aaPredicted RBP15.14■□□□□ 0.01
SMG6-215ENST00000574501 DLG1Q12959 904 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 DLGAP5Q15398 846 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 C3orf62Q6ZUJ4 267 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 OTOP1Q7RTM1 612 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 PDSS2Q86YH6 399 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 LARGE2Q8N3Y3 721 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 SSU72Q9NP77 194 aaKnown RBP15.14■□□□□ 0.01
SMG6-215ENST00000574501 SEL1LQ9UBV2 794 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 STK24Q9Y6E0 443 aa15.14■□□□□ 0.01
SMG6-215ENST00000574501 MEI4A8MW99 385 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 TXNDC9O14530 226 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 KITP10721 976 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 YY1P25490 414 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 SREBF1P36956 1147 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 MAGEA8P43361 318 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 AQP4P55087 323 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 R3HDM1Q15032 1099 aaKnown RBP15.13■□□□□ 0.01
SMG6-215ENST00000574501 CCDC142Q17RM4 750 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 SHROOM1Q2M3G4 852 aaPredicted RBP15.13■□□□□ 0.01
SMG6-215ENST00000574501 MSS51Q4VC12 460 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 MZB1Q8WU39 189 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 HSPBP1Q9NZL4 362 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 DENND3A2RUS2 1198 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 CAPN14A8MX76 684 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 ATP2A1O14983 1001 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 P4HA2O15460 535 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 TM4SF1P30408 202 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 HSF5Q4G112 596 aaPredicted RBP15.13■□□□□ 0.01
SMG6-215ENST00000574501 RNASEH2BQ5TBB1 312 aaKnown RBP15.13■□□□□ 0.01
SMG6-215ENST00000574501 ADGRD1Q6QNK2 874 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 NLRX1Q86UT6 975 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 RHOT1Q8IXI2 618 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 DAW1Q8N136 415 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.13■□□□□ 0.01
SMG6-215ENST00000574501 HELQQ8TDG4 1101 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 PYROXD1Q8WU10 500 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 C8orf37Q96NL8 207 aa15.13■□□□□ 0.01
SMG6-215ENST00000574501 DDX18Q9NVP1 670 aaKnown RBP15.13■□□□□ 0.01
SMG6-215ENST00000574501 PROSCO94903 275 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 TGDSO95455 350 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms