RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CTDP1Q9Y5B0 961 aaPredicted RBP20.1■□□□□ 0.81
SCARF1-206ENST00000573852 PIAS1O75925 651 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 CBX6O95503 412 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 ALDH3A1P30838 453 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 PSMC4P43686 418 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 MCL1Q07820 350 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 LVRNQ6Q4G3 990 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 FAM13CQ8NE31 585 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 ZNF75CPQ92670 426 aaPredicted RBP20.1■□□□□ 0.81
SCARF1-206ENST00000573852 TBC1D10AQ9BXI6 508 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 CYLDQ9NQC7 956 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 PSMC3IPQ9P2W1 217 aaPredicted RBP20.1■□□□□ 0.81
SCARF1-206ENST00000573852 SLC24A2Q9UI40 661 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 TCRBV5S1A1TA0A578 114 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 SKAP2O75563 359 aaPredicted RBP20.09■□□□□ 0.81
SCARF1-206ENST00000573852 KRT4P19013 534 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 PLCB3Q01970 1234 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 EFTUD2Q15029 972 aaKnown RBP eCLIP20.09■□□□□ 0.81
SCARF1-206ENST00000573852 SEZ6Q53EL9 994 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 INPP5DQ92835 1189 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 CLUHO75153 1309 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 SGK1O00141 431 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 PEX11AO75192 247 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 GNAZP19086 355 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 CDKN2BP42772 138 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 LRRC38Q5VT99 294 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 LONP2Q86WA8 852 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 NKD2Q969F2 451 aaPredicted RBP20.09■□□□□ 0.81
SCARF1-206ENST00000573852 C10orf88Q9H8K7 445 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 ANKFY1Q9P2R3 1169 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 SAE1Q9UBE0 346 aaPredicted RBP20.09■□□□□ 0.81
SCARF1-206ENST00000573852 RABGEF1Q9UJ41 708 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 SHOC2Q9UQ13 582 aa20.09■□□□□ 0.81
SCARF1-206ENST00000573852 LRRD1A4D1F6 860 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 H0YCG3 227 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 EDN1P05305 212 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 ITGAVP06756 1048 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 TBXAS1P24557 533 aaPredicted RBP20.08■□□□□ 0.81
SCARF1-206ENST00000573852 HMGB2P26583 209 aaKnown RBP20.08■□□□□ 0.81
SCARF1-206ENST00000573852 ZNF132P52740 706 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 MAPK6Q16659 721 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 TFDP3Q5H9I0 405 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 EFHC2Q5JST6 749 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 ASAP3Q8TDY4 903 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 CGRRF1Q99675 332 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 TARS2Q9BW92 718 aaKnown RBP20.08■□□□□ 0.81
SCARF1-206ENST00000573852 RNPEPL1Q9HAU8 725 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 PCDH9Q9HC56 1237 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 RNF146Q9NTX7 359 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 NUMBLQ9Y6R0 609 aa20.08■□□□□ 0.81
SCARF1-206ENST00000573852 COL4A5P29400 1685 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 DKC1O60832 514 aaKnown RBP eCLIP20.08■□□□□ 0.8
SCARF1-206ENST00000573852 EPHB2P29323 1055 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 SSTR1P30872 391 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 ACTR2P61160 394 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 NCOA4Q13772 614 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 EMC2Q15006 297 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 MSS51Q4VC12 460 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 DNAJC24Q6P3W2 148 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 DCUN1D2Q6PH85 259 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 MSTO1Q9BUK6 570 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 RPAP3Q9H6T3 665 aaPredicted RBP20.08■□□□□ 0.8
SCARF1-206ENST00000573852 JPH1Q9HDC5 661 aaPredicted RBP20.08■□□□□ 0.8
SCARF1-206ENST00000573852 CNTNAP2Q9UHC6 1331 aa20.08■□□□□ 0.8
SCARF1-206ENST00000573852 GLRA2P23416 452 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 GEMIN4P57678 1058 aaKnown RBP20.07■□□□□ 0.8
SCARF1-206ENST00000573852 TFDP1Q14186 410 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 RASA2Q15283 850 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 TAF1BQ53T94 588 aaPredicted RBP20.07■□□□□ 0.8
SCARF1-206ENST00000573852 PLEKHG4Q58EX7 1191 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 ANKRD22Q5VYY1 191 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 ABHD15Q6UXT9 468 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 ATG4CQ96DT6 458 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 C12orf65Q9H3J6 166 aaKnown RBP20.07■□□□□ 0.8
SCARF1-206ENST00000573852 SLC9A2Q9UBY0 812 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 ZMYND8Q9ULU4 1186 aaPredicted RBP20.07■□□□□ 0.8
SCARF1-206ENST00000573852 FARP1Q9Y4F1 1045 aaPredicted RBP20.07■□□□□ 0.8
SCARF1-206ENST00000573852 VWA5AO00534 786 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 ATP2A1O14983 1001 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 MYCNP04198 464 aaPredicted RBP20.07■□□□□ 0.8
SCARF1-206ENST00000573852 CALB2P22676 271 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 ADRA1DP25100 572 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 MTMR2Q13614 643 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 HIF1AQ16665 826 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 FNBP1LQ5T0N5 605 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 PPP1R2P3Q6NXS1 205 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 XRRA1Q6P2D8 792 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 CCDC125Q86Z20 511 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 UBR7Q8N806 425 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 SLC35B2Q8TB61 432 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 TRIM6Q9C030 488 aaPredicted RBP20.07■□□□□ 0.8
SCARF1-206ENST00000573852 NPHS2Q9NP85 383 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 ZNF277Q9NRM2 450 aaPredicted RBP20.07■□□□□ 0.8
SCARF1-206ENST00000573852 FBXO40Q9UH90 709 aa20.07■□□□□ 0.8
SCARF1-206ENST00000573852 FER1L6Q2WGJ9 1857 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 WDR91A4D1P6 747 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 LRRIQ4A6NIV6 560 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 MAFGO15525 162 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 CST3P01034 146 aaPredicted RBP20.06■□□□□ 0.8
SCARF1-206ENST00000573852 BRD2P25440 801 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms