RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 GALK1P51570 392 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 PPP2R3AQ06190 1150 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 RAD51AP2Q09MP3 1159 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 MYBPC2Q14324 1141 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 DMC1Q14565 340 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 SAFBQ15424 915 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRPF8-208ENST00000573716 LRSAM1Q6UWE0 723 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 CYP2U1Q7Z449 544 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 CMTM8Q8IZV2 173 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 DAW1Q8N136 415 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
PRPF8-208ENST00000573716 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 GATA6Q92908 595 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 BICD1Q96G01 975 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 FAM83CQ9BQN1 747 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 RUSC1Q9BVN2 902 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 TMEM121BQ9BXQ6 578 aaPredicted RBP13.23□□□□□ -0.29
PRPF8-208ENST00000573716 LRWD1Q9UFC0 647 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 UBQLN1Q9UMX0 589 aaKnown RBP13.23□□□□□ -0.29
PRPF8-208ENST00000573716 WASF3Q9UPY6 502 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 DENND4CQ5VZ89 1909 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 MYO16Q9Y6X6 1858 aa13.23□□□□□ -0.29
PRPF8-208ENST00000573716 SOBPA7XYQ1 873 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 E9PMD0 336 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 PPEF2O14830 753 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 CLDN3O15551 220 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 HYAL3O43820 417 aaPredicted RBP13.22□□□□□ -0.29
PRPF8-208ENST00000573716 TOM1L1O75674 476 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 ATF6P18850 670 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 TYMPP19971 482 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 CSRP1P21291 193 aaKnown RBP13.22□□□□□ -0.29
PRPF8-208ENST00000573716 MUTP22033 750 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 WEE1P30291 646 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 LRPAP1P30533 357 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 DHPSP49366 369 aaPredicted RBP13.22□□□□□ -0.29
PRPF8-208ENST00000573716 TUFMP49411 452 aaKnown RBP13.22□□□□□ -0.29
PRPF8-208ENST00000573716 NSUN7Q8NE18 718 aaKnown RBP13.22□□□□□ -0.29
PRPF8-208ENST00000573716 TSTD1Q8NFU3 115 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 OR10T2Q8NGX3 314 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 PIGKQ92643 395 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 USP13Q92995 863 aaPredicted RBP13.22□□□□□ -0.29
PRPF8-208ENST00000573716 EXOC4Q96A65 974 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 ACDQ96AP0 544 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 SENP8Q96LD8 212 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 IL21Q9HBE4 155 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 DNM3Q9UQ16 869 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 TSC2P49815 1807 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 KIAA1549LQ6ZVL6 1849 aa13.22□□□□□ -0.29
PRPF8-208ENST00000573716 TCHHQ07283 1943 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 DSPP15924 2871 aaKnown RBP13.21□□□□□ -0.29
PRPF8-208ENST00000573716 LACTBL1A8MY62 500 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 XPOTO43592 962 aaKnown RBP13.21□□□□□ -0.29
PRPF8-208ENST00000573716 CLTAP09496 248 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 TNFSF9P41273 254 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 MAPK8P45983 427 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 AARSP49588 968 aaKnown RBP eCLIP13.21□□□□□ -0.29
PRPF8-208ENST00000573716 IRX4P78413 519 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 ANKRD1Q15327 319 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 ZRSR1Q15695 479 aaKnown RBP13.21□□□□□ -0.29
PRPF8-208ENST00000573716 FBXO43Q4G163 708 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 USP39Q53GS9 565 aaKnown RBP13.21□□□□□ -0.29
PRPF8-208ENST00000573716 TTC38Q5R3I4 469 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 TXNDC8Q6A555 127 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 SYT13Q7L8C5 426 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 CPA6Q8N4T0 437 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 GTF3C6Q969F1 213 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 PLEKHA5Q9HAU0 1116 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 TDP1Q9NUW8 608 aa13.21□□□□□ -0.29
PRPF8-208ENST00000573716 ABI2Q9NYB9 513 aaPredicted RBP13.21□□□□□ -0.29
PRPF8-208ENST00000573716 MAGED2Q9UNF1 606 aaPredicted RBP13.21□□□□□ -0.29
PRPF8-208ENST00000573716 OBSL1O75147 1896 aa13.21□□□□□ -0.3
PRPF8-208ENST00000573716 ASCC3Q8N3C0 2202 aaKnown RBP13.2□□□□□ -0.3
PRPF8-208ENST00000573716 TTC26A0AVF1 554 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 CDX4O14627 284 aaPredicted RBP13.2□□□□□ -0.3
PRPF8-208ENST00000573716 EPB41L2O43491 1005 aaKnown RBP13.2□□□□□ -0.3
PRPF8-208ENST00000573716 CYP3A5P20815 502 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 BCKDHBP21953 392 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 GJA4P35212 333 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 SMTNP53814 917 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 SEC13P55735 322 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 LILRA4P59901 499 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 MCL1Q07820 350 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 MAPK7Q13164 816 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 GNL2Q13823 731 aaKnown RBP13.2□□□□□ -0.3
PRPF8-208ENST00000573716 PDGFRLQ15198 375 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 ME3Q16798 604 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 PMS2CLQ68D20 193 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 ANO7Q6IWH7 933 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 ARMCX6Q7L4S7 300 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 METTL23Q86XA0 190 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 STKLD1Q8NE28 680 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 MRPS31Q92665 395 aaKnown RBP13.2□□□□□ -0.3
PRPF8-208ENST00000573716 CD101Q93033 1021 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 SLC32A1Q9H598 525 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 TRPC7Q9HCX4 862 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 EBF1Q9UH73 591 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 KLK13Q9UKR3 277 aa13.2□□□□□ -0.3
PRPF8-208ENST00000573716 ASPMQ8IZT6 3477 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms