RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 CD52P31358 61 aa30.88■■■□□ 2.53
CTDNEP1-208ENST00000573600 TAP1Q03518 808 aa30.88■■■□□ 2.53
CTDNEP1-208ENST00000573600 ORC1Q13415 861 aa30.88■■■□□ 2.53
CTDNEP1-208ENST00000573600 LPIN1Q14693 890 aa30.88■■■□□ 2.53
CTDNEP1-208ENST00000573600 FEZF2Q8TBJ5 459 aa30.88■■■□□ 2.53
CTDNEP1-208ENST00000573600 STARD7Q9NQZ5 370 aa30.88■■■□□ 2.53
CTDNEP1-208ENST00000573600 TRIM17Q9Y577 477 aa30.88■■■□□ 2.53
CTDNEP1-208ENST00000573600 PCDHA3Q9Y5H8 950 aa30.88■■■□□ 2.53
CTDNEP1-208ENST00000573600 A0A0U1RQG5 324 aaPredicted RBP30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 KPNA7A9QM74 516 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 ZNF623O75123 536 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 RNASE9P60153 205 aaKnown RBP30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 TMCO3Q6UWJ1 677 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 PHLDB2Q86SQ0 1253 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 MRPL45Q9BRJ2 306 aaKnown RBP30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 DNAI2Q9GZS0 605 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 RNF19AQ9NV58 838 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 O00370 1275 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 MICAL2O94851 1124 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 PROSCO94903 275 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 PEX5P50542 639 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 SOX4Q06945 474 aaPredicted RBP30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 DCAF12L1Q5VU92 463 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 SEZ6LQ9BYH1 1024 aa30.87■■■□□ 2.53
CTDNEP1-208ENST00000573600 CCDC188H7C350 402 aa30.86■■■□□ 2.53
CTDNEP1-208ENST00000573600 ERLIN1O75477 346 aa30.86■■■□□ 2.53
CTDNEP1-208ENST00000573600 DSC3Q14574 896 aa30.86■■■□□ 2.53
CTDNEP1-208ENST00000573600 LLGL2Q6P1M3 1020 aa30.86■■■□□ 2.53
CTDNEP1-208ENST00000573600 DNAJC24Q6P3W2 148 aa30.86■■■□□ 2.53
CTDNEP1-208ENST00000573600 ALG3Q92685 438 aa30.86■■■□□ 2.53
CTDNEP1-208ENST00000573600 RNPC3Q96LT9 517 aaKnown RBP30.86■■■□□ 2.53
CTDNEP1-208ENST00000573600 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.86■■■□□ 2.53
CTDNEP1-208ENST00000573600 RNF216Q9NWF9 866 aaPredicted RBP30.86■■■□□ 2.53
CTDNEP1-208ENST00000573600 PHF24Q9UPV7 400 aa30.86■■■□□ 2.53
CTDNEP1-208ENST00000573600 KBTBD13C9JR72 458 aa30.85■■■□□ 2.53
CTDNEP1-208ENST00000573600 SOWAHAQ2M3V2 549 aa30.85■■■□□ 2.53
CTDNEP1-208ENST00000573600 ZNF618Q5T7W0 954 aa30.85■■■□□ 2.53
CTDNEP1-208ENST00000573600 LCLAT1Q6UWP7 414 aa30.85■■■□□ 2.53
CTDNEP1-208ENST00000573600 C3orf20Q8ND61 904 aa30.85■■■□□ 2.53
CTDNEP1-208ENST00000573600 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.85■■■□□ 2.53
CTDNEP1-208ENST00000573600 KRT35Q92764 455 aa30.85■■■□□ 2.53
CTDNEP1-208ENST00000573600 WDR35Q9P2L0 1181 aa30.85■■■□□ 2.53
CTDNEP1-208ENST00000573600 TCRBV5S1A1TA0A578 114 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 SKIP12755 728 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 GSCP56915 257 aaPredicted RBP30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 C8orf74Q6P047 294 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 HNRNPLLQ8WVV9 542 aaKnown RBP30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 ZFP42Q96MM3 310 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 LRRC1Q9BTT6 524 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 GOLGA2P5Q9HBQ8 144 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 IP6K2Q9UHH9 426 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 M0QYV0 167 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 THP07101 528 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 MAN1A1P33908 653 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 RWDD2BP57060 319 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 SEL1L2Q5TEA6 688 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 DPH6Q7L8W6 267 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 OR6B3Q8NGW1 331 aa30.84■■■□□ 2.53
CTDNEP1-208ENST00000573600 FGGP02679 453 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 FAM163BP0C2L3 166 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 CKBP12277 381 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 MLH1P40692 756 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 VSNL1P62760 191 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 PTPN20Q4JDL3 420 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 LIMS2Q7Z4I7 341 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 APPL2Q8NEU8 664 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 PGBD4Q96DM1 585 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 C18orf8Q96DM3 657 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 GAD1Q99259 594 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 PLVAPQ9BX97 442 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 OSBPL7Q9BZF2 842 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 TRIM7Q9C029 511 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 ARFGAP3Q9NP61 516 aa30.83■■■□□ 2.53
CTDNEP1-208ENST00000573600 A0A0U1RQF3 1178 aa30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 TMEM191CA6NGB0 347 aa30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 ARVCFO00192 962 aa30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 KRIT1O00522 736 aa30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 GPD2P43304 727 aa30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 LONRF2Q1L5Z9 754 aa30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 CC2D1AQ6P1N0 951 aaPredicted RBP30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 AGMOQ6ZNB7 445 aa30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 TOP6BLQ8N6T0 577 aa30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 GSTCDQ8NEC7 633 aa30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 CYTH4Q9UIA0 394 aa30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 SBDSQ9Y3A5 250 aaKnown RBP eCLIP30.82■■■□□ 2.52
CTDNEP1-208ENST00000573600 MEIS3P2A8K0S8 358 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 SPTLC1O15269 473 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 HUS1O60921 280 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 LILRA4P59901 499 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 PPP1R15BQ5SWA1 713 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 MIS12Q9H081 205 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 TRPV6Q9H1D0 765 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 TSPYL2Q9H2G4 693 aaPredicted RBP30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 UBN1Q9NPG3 1134 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 TSPAN16Q9UKR8 245 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 A8MXQ7 604 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 MGEA5O60502 916 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 HSPA6P17066 643 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 GABRB2P47870 512 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 MARCKSL1P49006 195 aa30.81■■■□□ 2.52
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