RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 GABRR2P28476 465 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 WEE1P30291 646 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 PNPLA4P41247 253 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 TUFMP49411 452 aaKnown RBP12.23□□□□□ -0.45
LITAF-206ENST00000571277 MLLT6P55198 1093 aaPredicted RBP12.23□□□□□ -0.45
LITAF-206ENST00000571277 CSTF1Q05048 431 aaKnown RBP12.23□□□□□ -0.45
LITAF-206ENST00000571277 SMARCB1Q12824 385 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 MTAPQ13126 283 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 STK38Q15208 465 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 MGAT5BQ3V5L5 792 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 CNNM4Q6P4Q7 775 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 ZC3H14Q6PJT7 736 aaKnown RBP12.23□□□□□ -0.45
LITAF-206ENST00000571277 SHC4Q6S5L8 630 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 MAMSTRQ6ZN01 415 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 TMEM150AQ86TG1 271 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 ITIH5Q86UX2 942 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 METTL23Q86XA0 190 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 GPIHBP1Q8IV16 184 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 SYCP3Q8IZU3 236 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 THEM5Q8N1Q8 247 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 PDCL2Q8N4E4 241 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 LRRC52Q8N7C0 313 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 ZBTB44Q8NCP5 570 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 SPPL2BQ8TCT7 592 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 C2orf15Q8WU43 125 aaKnown RBP12.23□□□□□ -0.45
LITAF-206ENST00000571277 E2F7Q96AV8 911 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 ZNF560Q96MR9 790 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 PKMYT1Q99640 499 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 PCIF1Q9H4Z3 704 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 PRMT8Q9NR22 394 aaPredicted RBP12.23□□□□□ -0.45
LITAF-206ENST00000571277 ITGA11Q9UKX5 1188 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 NDRG2Q9UN36 371 aaKnown RBP12.23□□□□□ -0.45
LITAF-206ENST00000571277 L1RE1Q9UN81 338 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 AGAP1Q9UPQ3 857 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 PIAS3Q9Y6X2 628 aa12.23□□□□□ -0.45
LITAF-206ENST00000571277 CHADO15335 359 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 NCAM2O15394 837 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 YEATS4O95619 227 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 FGF19O95750 216 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 TDGF1P13385 188 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 EHHADHQ08426 723 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 WDR44Q5JSH3 913 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 GPR158Q5T848 1215 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 EPM2AIP1Q7L775 607 aaPredicted RBP12.22□□□□□ -0.45
LITAF-206ENST00000571277 LIMS2Q7Z4I7 341 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 CBWD2Q8IUF1 395 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 CCDC65Q8IXS2 484 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 GPD1LQ8N335 351 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 MTMR12Q9C0I1 747 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 CHRDQ9H2X0 955 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 ATXN3LQ9H3M9 355 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 CUEDC2Q9H467 287 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 TASP1Q9H6P5 420 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 TMEM206Q9H813 350 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 GDAP2Q9NXN4 497 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 OBP2AQ9NY56 170 aa12.22□□□□□ -0.45
LITAF-206ENST00000571277 ABI2Q9NYB9 513 aaPredicted RBP12.22□□□□□ -0.45
LITAF-206ENST00000571277 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 GABRDO14764 452 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 TGFB1I1O43294 461 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 CUTAO60888 179 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 LILRB5O75023 590 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 F11P03951 625 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 CHRNB1P11230 501 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 CCNE1P24864 410 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 SOX9P48436 509 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 CYP4F8P98187 520 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 GAS6Q14393 721 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 VEPH1Q14D04 833 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 CCDC142Q17RM4 750 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 SOWAHAQ2M3V2 549 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 LMBRD2Q68DH5 695 aaPredicted RBP12.21□□□□□ -0.45
LITAF-206ENST00000571277 TSSK4Q6SA08 328 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 OSTM1Q86WC4 334 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 DCP1BQ8IZD4 617 aaKnown RBP12.21□□□□□ -0.45
LITAF-206ENST00000571277 CSGALNACT2Q8N6G5 542 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 OR5B17Q8NGF7 314 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 KCNG4Q8TDN1 519 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 GIPC2Q8TF65 315 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 CACTINQ8WUQ7 758 aaKnown RBP12.21□□□□□ -0.45
LITAF-206ENST00000571277 LEO1Q8WVC0 666 aaPredicted RBP12.21□□□□□ -0.45
LITAF-206ENST00000571277 FAM3CQ92520 227 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 ZFYVE19Q96K21 471 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 ZNF396Q96N95 335 aaPredicted RBP12.21□□□□□ -0.45
LITAF-206ENST00000571277 ACBD6Q9BR61 282 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 SLC46A2Q9BY10 475 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 INTS13Q9NVM9 706 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 PCDHB5Q9Y5E4 795 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 PCDHGA2Q9Y5H1 932 aa12.21□□□□□ -0.45
LITAF-206ENST00000571277 DNAH14Q0VDD8 3507 aa12.2□□□□□ -0.46
LITAF-206ENST00000571277 MYBPHLA2RUH7 354 aa12.2□□□□□ -0.46
LITAF-206ENST00000571277 SLC38A8A6NNN8 435 aa12.2□□□□□ -0.46
LITAF-206ENST00000571277 KIAA0391O15091 583 aaKnown RBP12.2□□□□□ -0.46
LITAF-206ENST00000571277 EIF3DO15371 548 aaKnown RBP eCLIP12.2□□□□□ -0.46
LITAF-206ENST00000571277 HCRTO43612 131 aa12.2□□□□□ -0.46
LITAF-206ENST00000571277 KINO60870 393 aaKnown RBP12.2□□□□□ -0.46
LITAF-206ENST00000571277 ACAT1P24752 427 aaKnown RBP12.2□□□□□ -0.46
LITAF-206ENST00000571277 CDC25CP30307 473 aa12.2□□□□□ -0.46
LITAF-206ENST00000571277 GPR15P49685 360 aa12.2□□□□□ -0.46
LITAF-206ENST00000571277 NLRP12P59046 1061 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms