RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ADAM9Q13443 819 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 NFKBIBQ15653 356 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 PSMD5Q16401 504 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 SASS6Q6UVJ0 657 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 ALKAL1Q6UXT8 129 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 PRR23CQ6ZRP0 262 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 NPAS3Q8IXF0 933 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 SLC7A14Q8TBB6 771 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 HASPINQ8TF76 798 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 ING5Q8WYH8 240 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 CCDC127Q96BQ5 260 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 PPP1R10Q96QC0 940 aaKnown RBP14.36□□□□□ -0.11
CCDC40-205ENST00000571028 IER2Q9BTL4 223 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 TTPALQ9BTX7 342 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 PLEKHA5Q9HAU0 1116 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 KIAA1586Q9HCI6 787 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 SEMA4GQ9NTN9 838 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 CNTN3Q9P232 1028 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 CGNQ9P2M7 1197 aaKnown RBP14.36□□□□□ -0.11
CCDC40-205ENST00000571028 TUBGCP4Q9UGJ1 667 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 TRAF3IP3Q9Y228 551 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 FRMD4BQ9Y2L6 1034 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 MRPS23Q9Y3D9 190 aaKnown RBP14.36□□□□□ -0.11
CCDC40-205ENST00000571028 CHD8Q9HCK8 2581 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 COL4A3Q01955 1670 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 MAN2B1O00754 1011 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 ECI2O75521 394 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 DLATP10515 647 aaKnown RBP14.35□□□□□ -0.11
CCDC40-205ENST00000571028 KCNE1P15382 129 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 CCNE1P24864 410 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 RPL13P26373 211 aaKnown RBP14.35□□□□□ -0.11
CCDC40-205ENST00000571028 CCR3P51677 355 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 NLRP12P59046 1061 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 SOX4Q06945 474 aaPredicted RBP14.35□□□□□ -0.11
CCDC40-205ENST00000571028 TUSC3Q13454 348 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 SIM2Q14190 667 aaPredicted RBP14.35□□□□□ -0.11
CCDC40-205ENST00000571028 HSP90AA2PQ14568 343 aaPredicted RBP14.35□□□□□ -0.11
CCDC40-205ENST00000571028 TMEM132DQ14C87 1099 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 SNRNP35Q16560 246 aaKnown RBP14.35□□□□□ -0.11
CCDC40-205ENST00000571028 DPCR1Q3MIW9 517 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 COBLL1Q53SF7 1204 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 RTP2Q5QGT7 225 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 CENPPQ6IPU0 288 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 PDXDC1Q6P996 788 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 BRSK2Q8IWQ3 736 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 CD302Q8IX05 232 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 DHTKD1Q96HY7 919 aaPredicted RBP14.35□□□□□ -0.11
CCDC40-205ENST00000571028 PAAF1Q9BRP4 392 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 RALYQ9UKM9 306 aaKnown RBP14.35□□□□□ -0.11
CCDC40-205ENST00000571028 PATJQ8NI35 1801 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 CHD6Q8TD26 2715 aa14.35□□□□□ -0.11
CCDC40-205ENST00000571028 DOCK8Q8NF50 2099 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 CETN3O15182 167 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 IL18RAPO95256 599 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 PPP1R2P41236 205 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 CLCNKBP51801 687 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 CYP24A1Q07973 514 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 PAK1Q13153 545 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 COL9A2Q14055 689 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-205ENST00000571028 CSRP2Q16527 193 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 KLHL40Q2TBA0 621 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 ZCWPW2Q504Y3 356 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 XKR4Q5GH76 650 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 FAM171A1Q5VUB5 890 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 CREBRFQ8IUR6 639 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 C12orf56Q8IXR9 622 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 EFCAB13Q8IY85 973 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 MLKLQ8NB16 471 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 BEST2Q8NFU1 509 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 DNASE1L2Q92874 299 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 FNBP1Q96RU3 617 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 CHRDQ9H2X0 955 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 BRD9Q9H8M2 597 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 SLC38A7Q9NVC3 462 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 DMAC2Q9NW81 257 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 HCFC1R1Q9NWW0 138 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 GDE1Q9NZC3 331 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 UBQLN1Q9UMX0 589 aaKnown RBP14.34□□□□□ -0.11
CCDC40-205ENST00000571028 USP24Q9UPU5 2620 aa14.34□□□□□ -0.11
CCDC40-205ENST00000571028 BICDL2A1A5D9 508 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 PODXLO00592 558 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 AKAP3O75969 853 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 B3GAT3O94766 335 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 TMEM191BP0C7N4 346 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 TNNI1P19237 187 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 IGFBP6P24592 240 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-205ENST00000571028 NAB2Q15742 525 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-205ENST00000571028 EDRF1Q3B7T1 1238 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 AASDHQ4L235 1098 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-205ENST00000571028 SLC9A9Q8IVB4 645 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 FAM186BQ8IYM0 893 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 PIK3R5Q8WYR1 880 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 MCRS1Q96EZ8 462 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 CLSTN3Q9BQT9 956 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 ASB7Q9H672 318 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 MMRN2Q9H8L6 949 aa14.33□□□□□ -0.12
CCDC40-205ENST00000571028 XPOTO43592 962 aaKnown RBP14.32□□□□□ -0.12
CCDC40-205ENST00000571028 CLSTN1O94985 981 aa14.32□□□□□ -0.12
CCDC40-205ENST00000571028 KIF4AO95239 1232 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms