RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 ZSCAN31Q96LW9 406 aaPredicted RBP7.09□□□□□ -1.27
SMG6-204ENST00000570606 ACAP3Q96P50 834 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 RUSC1Q9BVN2 902 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 TARS2Q9BW92 718 aaKnown RBP7.09□□□□□ -1.27
SMG6-204ENST00000570606 SLITRK6Q9H5Y7 841 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 CYP4F11Q9HBI6 524 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 SH2B1Q9NRF2 756 aaPredicted RBP7.09□□□□□ -1.27
SMG6-204ENST00000570606 PPP4R2Q9NY27 417 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 ARHGAP28Q9P2N2 729 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 NCDNQ9UBB6 729 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 DNM3Q9UQ16 869 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 MRPS17Q9Y2R5 130 aaKnown RBP7.09□□□□□ -1.27
SMG6-204ENST00000570606 INSL5Q9Y5Q6 135 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 ZNF638Q14966 1978 aaKnown RBP7.09□□□□□ -1.27
SMG6-204ENST00000570606 COL4A2P08572 1712 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 NUP210Q8TEM1 1887 aaPredicted RBP7.09□□□□□ -1.28
SMG6-204ENST00000570606 TSC2P49815 1807 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 SPAG17Q6Q759 2223 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 ARHGEF37A1IGU5 675 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 PP2D1A8MPX8 630 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 LAD1O00515 517 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 ZNF197O14709 1029 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 SLC16A4O15374 487 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 NCAM2O15394 837 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 PTPN2P17706 415 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 IGFBP6P24592 240 aaPredicted RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 TARSP26639 723 aaKnown RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 RAD51AP2Q09MP3 1159 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 GRM2Q14416 872 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 ZNF528Q3MIS6 628 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 ZBTB41Q5SVQ8 909 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 CYP4A22Q5TCH4 519 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 MCTP1Q6DN14 999 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 IQCEQ6IPM2 695 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 CD300LGQ6UXG3 332 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 ZNF852Q6ZMS4 543 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 LYSMD3Q7Z3D4 306 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 DGLUCYQ7Z3D6 616 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 PRICKLE2Q7Z3G6 844 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 TREML1Q86YW5 311 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 IGSF22Q8N9C0 903 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 APPL2Q8NEU8 664 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 ZNF461Q8TAF7 563 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 ATRIPQ8WXE1 791 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 DNASE1L2Q92874 299 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 SECISBP2LQ93073 1101 aaKnown RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 C18orf25Q96B23 403 aaPredicted RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 ELSPBP1Q96BH3 223 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 RMDN1Q96DB5 314 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 TCEAL4Q96EI5 215 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 BICD1Q96G01 975 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 CDK5RAP3Q96JB5 506 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 ZMAT2Q96NC0 199 aaKnown RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 DDX23Q9BUQ8 820 aaKnown RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 TIPINQ9BVW5 301 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 OSBPL6Q9BZF3 934 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 BRD9Q9H8M2 597 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 C17orf75Q9HAS0 396 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 ZFP14Q9HCL3 533 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 AVENQ9NQS1 362 aaPredicted RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 ASAH2Q9NR71 780 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 HEBP1Q9NRV9 189 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 KIAA1522Q9P206 1035 aaPredicted RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 CNTN3Q9P232 1028 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 TUBGCP4Q9UGJ1 667 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 FBXL5Q9UKA1 691 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 FBXO4Q9UKT5 387 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 NDRG2Q9UN36 371 aaKnown RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 SMG5Q9UPR3 1016 aaKnown RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 MTF2Q9Y483 593 aaPredicted RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 PCDHB6Q9Y5E3 794 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 PCDHGA2Q9Y5H1 932 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 GPC6Q9Y625 555 aaPredicted RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 ACACBO00763 2458 aa7.08□□□□□ -1.28
SMG6-204ENST00000570606 CNOT1A5YKK6 2376 aaKnown RBP7.08□□□□□ -1.28
SMG6-204ENST00000570606 KIF26AQ9ULI4 1882 aaPredicted RBP7.07□□□□□ -1.28
SMG6-204ENST00000570606 SDK1Q7Z5N4 2213 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 EPG5Q9HCE0 2579 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 TTLL8A6PVC2 850 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 TGFBR3LH3BV60 316 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 TOM1L1O75674 476 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 ABLIM3O94929 683 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 SEC24AO95486 1093 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 CXCL8P10145 99 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 MYL4P12829 197 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 ATF2P15336 505 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 KCNE1P15382 129 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 PROZP22891 400 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 MZF1P28698 734 aaPredicted RBP7.07□□□□□ -1.28
SMG6-204ENST00000570606 MARCKSP29966 332 aaPredicted RBP7.07□□□□□ -1.28
SMG6-204ENST00000570606 CDC25AP30304 524 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 RPL9P32969 192 aaKnown RBP7.07□□□□□ -1.28
SMG6-204ENST00000570606 TAGLNQ01995 201 aaKnown RBP7.07□□□□□ -1.28
SMG6-204ENST00000570606 ADCY1Q08828 1119 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 TWF1Q12792 350 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 MAPK7Q13164 816 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 PDIA5Q14554 519 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 PUM1Q14671 1186 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMG6-204ENST00000570606 XKR4Q5GH76 650 aa7.07□□□□□ -1.28
SMG6-204ENST00000570606 TPGS2Q68CL5 300 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms