RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 RCOR2Q8IZ40 523 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 TMC2Q8TDI7 906 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 CLEC4DQ8WXI8 215 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 NGRNQ9NPE2 291 aaKnown RBP16.12■□□□□ 0.17
USP43-202ENST00000570475 ANKEF1Q9NU02 776 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 PPARGC1AQ9UBK2 798 aaKnown RBP16.12■□□□□ 0.17
USP43-202ENST00000570475 XPO7Q9UIA9 1087 aaKnown RBP16.12■□□□□ 0.17
USP43-202ENST00000570475 MYPNQ86TC9 1320 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 SYNJ2BP-COX16A0A087WUM0 186 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 HAUS5O94927 633 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 CST3P01034 146 aaPredicted RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 MAPTP10636 758 aaKnown RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 ARFIP2P53365 341 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 GCNT1Q02742 428 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 PPP2R5DQ14738 602 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 NSUN6Q8TEA1 469 aaKnown RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 TBC1D10AQ9BXI6 508 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 TRIM55Q9BYV6 548 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 COX16Q9P0S2 106 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 PSMC3IPQ9P2W1 217 aaPredicted RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 DNALI1O14645 258 aaPredicted RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 DKC1O60832 514 aaKnown RBP eCLIP16.11■□□□□ 0.17
USP43-202ENST00000570475 HADHBP55084 474 aaKnown RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 NCKAP1LP55160 1127 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 NOMO3P69849 1222 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 MGAT5Q09328 741 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 MKRN3Q13064 507 aaKnown RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 ZNF699Q32M78 642 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 PAFAH2Q99487 392 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 SHCBP1LQ9BZQ2 653 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 A1CFQ9NQ94 594 aaKnown RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 ZNF302Q9NR11 478 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 NKX1-2Q9UD57 310 aaPredicted RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 PTPRJQ12913 1337 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 UNGP13051 313 aaPredicted RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 MUTP22033 750 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 IVDP26440 423 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 EIF3EP60228 445 aaKnown RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 KRT81Q14533 505 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 LRRC36Q1X8D7 754 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 WLSQ5T9L3 541 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 TRABD2AQ86V40 505 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 TMEM130Q8N3G9 435 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 EXD1Q8NHP7 514 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 FAF2Q96CS3 445 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 FBXO6Q9NRD1 293 aaPredicted RBP16.11■□□□□ 0.17
USP43-202ENST00000570475 DONSONQ9NYP3 566 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 SLC17A7Q9P2U7 560 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 TJP2Q9UDY2 1190 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 CHKBQ9Y259 395 aa16.11■□□□□ 0.17
USP43-202ENST00000570475 ARHGAP42A6NI28 874 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 LIASO43766 372 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 AVILO75366 819 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 RBP3P10745 1247 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 ANKRD22Q5VYY1 191 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 RNF149Q8NC42 400 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 UBA3Q8TBC4 463 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 ZNF75CPQ92670 426 aaPredicted RBP16.1■□□□□ 0.17
USP43-202ENST00000570475 WRNIP1Q96S55 665 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 ZMYND8Q9ULU4 1186 aaPredicted RBP16.1■□□□□ 0.17
USP43-202ENST00000570475 NOP56O00567 594 aaKnown RBP16.1■□□□□ 0.17
USP43-202ENST00000570475 MCF2LO15068 1137 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 SMIM24O75264 130 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 TMPRSS15P98073 1019 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 OR6B2Q6IFH4 312 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 BZW1Q7L1Q6 419 aaKnown RBP16.1■□□□□ 0.17
USP43-202ENST00000570475 GRAMD1AQ96CP6 724 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 ZBTB10Q96DT7 871 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 GPATCH2LQ9NWQ4 482 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 PIH1D1Q9NWS0 290 aaKnown RBP16.1■□□□□ 0.17
USP43-202ENST00000570475 COL16A1Q07092 1604 aaPredicted RBP16.1■□□□□ 0.17
USP43-202ENST00000570475 PSTPIP1O43586 416 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 ENO1P06733 434 aaKnown RBP16.1■□□□□ 0.17
USP43-202ENST00000570475 RFC1P35251 1148 aaPredicted RBP16.1■□□□□ 0.17
USP43-202ENST00000570475 NBPF20Q3BBV1 942 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 ZCCHC9Q8N567 271 aaKnown RBP16.1■□□□□ 0.17
USP43-202ENST00000570475 ATP11CQ8NB49 1132 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 SPATA18Q8TC71 538 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 ASAP3Q8TDY4 903 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 TTC1Q99614 292 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 TMEM109Q9BVC6 243 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 TSSK1BQ9BXA7 367 aa16.1■□□□□ 0.17
USP43-202ENST00000570475 WDR46O15213 610 aaKnown RBP16.09■□□□□ 0.17
USP43-202ENST00000570475 BGNP21810 368 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 RGS7P49802 495 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 HSD17B4P51659 736 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 CDH6P55285 790 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 BMPR2Q13873 1038 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 ZNF268Q14587 947 aaPredicted RBP16.09■□□□□ 0.17
USP43-202ENST00000570475 CEP128Q6ZU80 1094 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 OTOAQ7RTW8 1153 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 TTLL6Q8N841 843 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 PPFIBP2Q8ND30 876 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 HEXIM2Q96MH2 286 aaKnown RBP16.09■□□□□ 0.17
USP43-202ENST00000570475 FAM161BQ96MY7 647 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 TTC25Q96NG3 672 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 CISHQ9NSE2 258 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 ZNF536O15090 1300 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 I3L4J1 428 aa16.09■□□□□ 0.17
USP43-202ENST00000570475 WNT10BO00744 389 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms