RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GMEB2Q9UKD1 530 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 RAB23Q9ULC3 237 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 MAGED2Q9UNF1 606 aaPredicted RBP9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 ASB3Q9Y575 518 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 ACACBO00763 2458 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 TCHHQ07283 1943 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 MYBPHLA2RUH7 354 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 MYMKA6NI61 221 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 KPNA7A9QM74 516 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 BMP15O95972 392 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 HAPLN1P10915 354 aaPredicted RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 TGM1P22735 817 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 ACAT1P24752 427 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 POLR2BP30876 1174 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 PXNP49023 591 aaPredicted RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 TUFMP49411 452 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 NRLP54845 237 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 SIM2Q14190 667 aaPredicted RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 LRRC32Q14392 662 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 PPP2R5DQ14738 602 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 CCDC142Q17RM4 750 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 ARHGAP29Q52LW3 1261 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 TRIM68Q6AZZ1 485 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 ZNF720Q7Z2F6 126 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 BRAPQ7Z569 592 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 SPEM1Q8N4L4 309 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 MAB21L3Q8N8X9 362 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 BPIFB1Q8TDL5 484 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 BORCS6Q96GS4 357 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 GCNAQ96QF7 691 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 TSPAN18Q96SJ8 248 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 PI4K2AQ9BTU6 479 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 FAM126AQ9BYI3 521 aaPredicted RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 CCSER1Q9C0I3 900 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 C8orf33Q9H7E9 229 aaPredicted RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 GKN1Q9NS71 199 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 POLR3BQ9NW08 1133 aaPredicted RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 CDV3Q9UKY7 258 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 DSEQ9UL01 958 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 CCL26Q9Y258 94 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 DERAQ9Y315 318 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 C2CD2Q9Y426 696 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 STYXL1Q9Y6J8 313 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 KIF26AQ9ULI4 1882 aaPredicted RBP9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 DNAH14Q0VDD8 3507 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 RALGAPA1Q6GYQ0 2036 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 FRYLO94915 3013 aa9.29□□□□□ -0.92
CTDNEP1-203ENST00000570385 TSC2P49815 1807 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 ZNF638Q14966 1978 aaKnown RBP9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 K7ESF4 209 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 HCRTO43612 131 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 EXTL3O43909 919 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 PRPF40AO75400 957 aaKnown RBP9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 GCNT3O95395 438 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 ITGB3P05106 788 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 IDEP14735 1019 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 SCP2P22307 547 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 CDC25CP30307 473 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 MCM2P49736 904 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 CASP5P51878 434 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 LMNB2Q03252 620 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 BFSP1Q12934 665 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 PTPAQ15257 358 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 DDR2Q16832 855 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 SV2CQ496J9 727 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 RRAGBQ5VZM2 374 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 TXNDC8Q6A555 127 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 PKN3Q6P5Z2 889 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 MAMSTRQ6ZN01 415 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 TMEM150AQ86TG1 271 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 RALGPS2Q86X27 583 aaPredicted RBP9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 SYCP3Q8IZU3 236 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 CMTM8Q8IZV2 173 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 PDCL2Q8N4E4 241 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 CELF5Q8N6W0 485 aaKnown RBP9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 FGFBP2Q9BYJ0 223 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 EBF3Q9H4W6 596 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 PCIF1Q9H4Z3 704 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 FOXD4L1Q9NU39 408 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 CCDC39Q9UFE4 941 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 FBXO2Q9UK22 296 aaPredicted RBP9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 AGAP1Q9UPQ3 857 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 PCDHB5Q9Y5E4 795 aa9.28□□□□□ -0.92
CTDNEP1-203ENST00000570385 EPG5Q9HCE0 2579 aa9.27□□□□□ -0.92
CTDNEP1-203ENST00000570385 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 OTOL1A6NHN0 477 aaPredicted RBP9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 PPP1R37O75864 691 aa9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 PRPF6O94906 941 aaKnown RBP9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 IL18RAPO95256 599 aa9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 FGF19O95750 216 aa9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 KRT19P08727 400 aa9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 ARSAP15289 507 aa9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 HMGA1P17096 107 aaKnown RBP9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 KCNA4P22459 653 aa9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 CYP2F1P24903 491 aa9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 AVPR1AP37288 418 aa9.27□□□□□ -0.93
CTDNEP1-203ENST00000570385 MLLT6P55198 1093 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms