RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 RAD54LQ92698 747 aa22.76■■□□□ 1.23
PKD1-240ENST00000570253 CNTNAP3BQ96NU0 1288 aa22.76■■□□□ 1.23
PKD1-240ENST00000570253 MKNK1Q9BUB5 465 aa22.76■■□□□ 1.23
PKD1-240ENST00000570253 CNTNAP3Q9BZ76 1288 aa22.76■■□□□ 1.23
PKD1-240ENST00000570253 DPP3Q9NY33 737 aa22.76■■□□□ 1.23
PKD1-240ENST00000570253 ANO9A1A5B4 782 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 TULP1O00294 542 aaPredicted RBP22.75■■□□□ 1.23
PKD1-240ENST00000570253 HRO43593 1189 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 PLCG1P19174 1290 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 DDX6P26196 483 aaKnown RBP eCLIP22.75■■□□□ 1.23
PKD1-240ENST00000570253 ACOT2P49753 483 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 TSPY1Q01534 308 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 POU5F1Q01860 360 aaKnown RBP22.75■■□□□ 1.23
PKD1-240ENST00000570253 GRSF1Q12849 480 aaKnown RBP eCLIP22.75■■□□□ 1.23
PKD1-240ENST00000570253 POSTNQ15063 836 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 CC2D1AQ6P1N0 951 aaPredicted RBP22.75■■□□□ 1.23
PKD1-240ENST00000570253 WDR5BQ86VZ2 330 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 NT5DC4Q86YG4 428 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 GIPC2Q8TF65 315 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 KIF9Q9HAQ2 790 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 ABI2Q9NYB9 513 aaPredicted RBP22.75■■□□□ 1.23
PKD1-240ENST00000570253 SMC3Q9UQE7 1217 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 TSC2P49815 1807 aa22.75■■□□□ 1.23
PKD1-240ENST00000570253 K7ESF4 209 aa22.74■■□□□ 1.23
PKD1-240ENST00000570253 IL18RAPO95256 599 aa22.74■■□□□ 1.23
PKD1-240ENST00000570253 ATF6P18850 670 aa22.74■■□□□ 1.23
PKD1-240ENST00000570253 NMT1P30419 496 aaKnown RBP22.74■■□□□ 1.23
PKD1-240ENST00000570253 HOXA6P31267 233 aa22.74■■□□□ 1.23
PKD1-240ENST00000570253 PNPLA4P41247 253 aa22.74■■□□□ 1.23
PKD1-240ENST00000570253 CCINQ13939 588 aa22.74■■□□□ 1.23
PKD1-240ENST00000570253 CMTM8Q8IZV2 173 aa22.74■■□□□ 1.23
PKD1-240ENST00000570253 POMGNT1Q8WZA1 660 aa22.74■■□□□ 1.23
PKD1-240ENST00000570253 MRPS31Q92665 395 aaKnown RBP22.74■■□□□ 1.23
PKD1-240ENST00000570253 SLC8A2Q9UPR5 921 aa22.74■■□□□ 1.23
PKD1-240ENST00000570253 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.74■■□□□ 1.23
PKD1-240ENST00000570253 PCDHB5Q9Y5E4 795 aa22.74■■□□□ 1.23
PKD1-240ENST00000570253 ANK1P16157 1881 aa22.73■■□□□ 1.23
PKD1-240ENST00000570253 PRAMEF12O95522 483 aa22.73■■□□□ 1.23
PKD1-240ENST00000570253 HAPLN1P10915 354 aaPredicted RBP22.73■■□□□ 1.23
PKD1-240ENST00000570253 DMWDQ09019 674 aa22.73■■□□□ 1.23
PKD1-240ENST00000570253 KARSQ15046 597 aaKnown RBP22.73■■□□□ 1.23
PKD1-240ENST00000570253 NFE2Q16621 373 aaPredicted RBP22.73■■□□□ 1.23
PKD1-240ENST00000570253 AASDHQ4L235 1098 aaPredicted RBP22.73■■□□□ 1.23
PKD1-240ENST00000570253 PPM1JQ5JR12 505 aa22.73■■□□□ 1.23
PKD1-240ENST00000570253 IL31Q6EBC2 164 aa22.73■■□□□ 1.23
PKD1-240ENST00000570253 C12orf50Q8NA57 414 aaPredicted RBP22.73■■□□□ 1.23
PKD1-240ENST00000570253 HVCN1Q96D96 273 aa22.73■■□□□ 1.23
PKD1-240ENST00000570253 TMX3Q96JJ7 454 aa22.73■■□□□ 1.23
PKD1-240ENST00000570253 UPF2Q9HAU5 1272 aaKnown RBP22.73■■□□□ 1.23
PKD1-240ENST00000570253 BLOC1S4Q9NUP1 217 aa22.73■■□□□ 1.23
PKD1-240ENST00000570253 EXOC7Q9UPT5 735 aa22.73■■□□□ 1.23
PKD1-240ENST00000570253 SPTBN2O15020 2390 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 KPNA7A9QM74 516 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 ADRB1P08588 477 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 CSH1P0DML2 217 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 CSH2P0DML3 217 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 TNK2Q07912 1038 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 SRSF5Q13243 272 aaKnown RBP22.72■■□□□ 1.23
PKD1-240ENST00000570253 LARP1BQ659C4 914 aaKnown RBP22.72■■□□□ 1.23
PKD1-240ENST00000570253 SLC39A4Q6P5W5 647 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 BRAPQ7Z569 592 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 LRRC3BQ96PB8 259 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 CCSER1Q9C0I3 900 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 ST6GALNAC4Q9H4F1 302 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 GKN1Q9NS71 199 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 UXTQ9UBK9 157 aaPredicted RBP22.72■■□□□ 1.23
PKD1-240ENST00000570253 CCDC39Q9UFE4 941 aa22.72■■□□□ 1.23
PKD1-240ENST00000570253 ZNF638Q14966 1978 aaKnown RBP22.71■■□□□ 1.23
PKD1-240ENST00000570253 SOBPA7XYQ1 873 aa22.71■■□□□ 1.23
PKD1-240ENST00000570253 ANKRD63C9JTQ0 380 aa22.71■■□□□ 1.23
PKD1-240ENST00000570253 CCDC192P0DO97 292 aa22.71■■□□□ 1.23
PKD1-240ENST00000570253 KCNA4P22459 653 aa22.71■■□□□ 1.23
PKD1-240ENST00000570253 RUNX3Q13761 415 aa22.71■■□□□ 1.23
PKD1-240ENST00000570253 WSCD1Q658N2 575 aa22.71■■□□□ 1.23
PKD1-240ENST00000570253 FAM160A2Q8N612 972 aaPredicted RBP22.71■■□□□ 1.23
PKD1-240ENST00000570253 MAB21L3Q8N8X9 362 aa22.71■■□□□ 1.23
PKD1-240ENST00000570253 CACTINQ8WUQ7 758 aaKnown RBP22.71■■□□□ 1.23
PKD1-240ENST00000570253 SLC46A2Q9BY10 475 aa22.71■■□□□ 1.23
PKD1-240ENST00000570253 IL21Q9HBE4 155 aa22.71■■□□□ 1.23
PKD1-240ENST00000570253 MAGED2Q9UNF1 606 aaPredicted RBP22.71■■□□□ 1.23
PKD1-240ENST00000570253 R3HCC1Q9Y3T6 440 aaKnown RBP22.71■■□□□ 1.23
PKD1-240ENST00000570253 SCN1AP35498 2009 aa22.7■■□□□ 1.23
PKD1-240ENST00000570253 CCDC163A0A0D9SF12 145 aa22.7■■□□□ 1.22
PKD1-240ENST00000570253 PRPF40AO75400 957 aaKnown RBP22.7■■□□□ 1.22
PKD1-240ENST00000570253 DDIT3P35638 169 aa22.7■■□□□ 1.22
PKD1-240ENST00000570253 TXLNAP40222 546 aa22.7■■□□□ 1.22
PKD1-240ENST00000570253 RPL10AP62906 217 aaKnown RBP22.7■■□□□ 1.22
PKD1-240ENST00000570253 ZC2HC1CQ53FD0 456 aaPredicted RBP22.7■■□□□ 1.22
PKD1-240ENST00000570253 CACNA2D4Q7Z3S7 1137 aa22.7■■□□□ 1.22
PKD1-240ENST00000570253 LOXL4Q96JB6 756 aa22.7■■□□□ 1.22
PKD1-240ENST00000570253 SMG9Q9H0W8 520 aaKnown RBP22.7■■□□□ 1.22
PKD1-240ENST00000570253 TDP1Q9NUW8 608 aa22.7■■□□□ 1.22
PKD1-240ENST00000570253 SEL1LQ9UBV2 794 aa22.7■■□□□ 1.22
PKD1-240ENST00000570253 STYXL1Q9Y6J8 313 aa22.7■■□□□ 1.22
PKD1-240ENST00000570253 KIF26AQ9ULI4 1882 aaPredicted RBP22.7■■□□□ 1.22
PKD1-240ENST00000570253 TPRP12270 2363 aaKnown RBP22.7■■□□□ 1.22
PKD1-240ENST00000570253 HUS1O60921 280 aa22.69■■□□□ 1.22
PKD1-240ENST00000570253 RPP40O75818 363 aaKnown RBP22.69■■□□□ 1.22
PKD1-240ENST00000570253 LDHAP00338 332 aaKnown RBP22.69■■□□□ 1.22
PKD1-240ENST00000570253 NLRP12P59046 1061 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms