RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 MMS19Q96T76 1030 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 TSG101Q99816 390 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 CRISPLD1Q9H336 500 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 IGSF9Q9P2J2 1179 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 SORCS3Q9UPU3 1222 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 SLC27A5Q9Y2P5 690 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 YIPF1Q9Y548 306 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 PCSK1P29120 753 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 EPHB3P54753 998 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 MYL6P60660 151 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 TNNC1P63316 161 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 NFE2Q16621 373 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 ZACNQ401N2 412 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 TMEM31Q5JXX7 168 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 ANKRD40Q6AI12 368 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 OSTM1Q86WC4 334 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 ITFG1Q8TB96 612 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 NXPE3Q969Y0 559 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 DHTKD1Q96HY7 919 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 CORO1BQ9BR76 489 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 MKNK1Q9BUB5 465 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 VRTNQ9H8Y1 702 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 KCNK12Q9HB15 430 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 CEP72Q9P209 647 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 CDH7Q9ULB5 785 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 MRPS23Q9Y3D9 190 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 ASB3Q9Y575 518 aa14.81□□□□□ -0.04
HERPUD1-218ENST00000569569 GREB1Q4ZG55 1949 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 ZNF197O14709 1029 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 PSMA7O14818 248 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 TACC1O75410 805 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 ASGR2P07307 311 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 EPB41P11171 864 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 WARSP23381 471 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 ACAT1P24752 427 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 CCNE1P24864 410 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 MCCD1P59942 119 aaPredicted RBP14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 FKBP3Q00688 224 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 LRRC63Q05C16 580 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 MTMR3Q13615 1198 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 NCOA4Q13772 614 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 MORC3Q14149 939 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 MGAT5BQ3V5L5 792 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 INTS6LQ5JSJ4 861 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 C1orf220Q5T0J3 134 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 CYP4A22Q5TCH4 519 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 SV2AQ7L0J3 742 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 UBALD2Q8IYN6 164 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 LEMD2Q8NC56 503 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 KBTBD7Q8WVZ9 684 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 FGF13Q92913 245 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 XYLT2Q9H1B5 865 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 PCDHB5Q9Y5E4 795 aa14.8□□□□□ -0.04
HERPUD1-218ENST00000569569 MICAL2O94851 1124 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 VNN1O95497 513 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 HAPLN1P10915 354 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 GNL1P36915 607 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 SIGLEC14Q08ET2 396 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 TDGQ13569 410 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 SLC5A9Q2M3M2 681 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 SGSM1Q2NKQ1 1148 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 ZNF699Q32M78 642 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 ZNF667Q5HYK9 610 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 PRSS36Q5K4E3 855 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 TRIM67Q6ZTA4 783 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 PDZD4Q76G19 769 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 ZC3H3Q8IXZ2 948 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 TTC9BQ8N6N2 239 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 EEF2KMTQ96G04 330 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 PKMYT1Q99640 499 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 SEPT5Q99719 369 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 DNAJC25Q9H1X3 360 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 SNX25Q9H3E2 840 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 C11orf16Q9NQ32 467 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 ASAH2Q9NR71 780 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 TMLHEQ9NVH6 421 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 ABI2Q9NYB9 513 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 KIAA1468Q9P260 1216 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 NXF1Q9UBU9 619 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 GTF3C4Q9UKN8 822 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 CDH9Q9ULB4 789 aa14.79□□□□□ -0.04
HERPUD1-218ENST00000569569 TRIM49BA6NDI0 452 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 PRR33A8MZF0 331 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 PPP1R3GB7ZBB8 358 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 ANHXE9PGG2 379 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 BIN1O00499 593 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 CLSTN1O94985 981 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 PDGFRBP09619 1106 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 TRIM49P0CI25 452 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 TRIM49CP0CI26 452 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 CD44P16070 742 aaKnown RBP14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 BMP6P22004 513 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 LMO2P25791 158 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 GTF2H1P32780 548 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 CDR1P51861 262 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 PMS1P54277 932 aaKnown RBP14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 EPHA5P54756 1037 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 MAPRE1Q15691 268 aaKnown RBP14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 CAMK4Q16566 473 aa14.78□□□□□ -0.04
HERPUD1-218ENST00000569569 FAM171BQ6P995 826 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms