RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 BEST2Q8NFU1 509 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 HMGB4Q8WW32 186 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 PSPC1Q8WXF1 523 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 CRYGNQ8WXF5 182 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 NAF1Q96HR8 494 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 CPB2Q96IY4 423 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 PGBD1Q96JS3 809 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 MAP3K14Q99558 947 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 SH2D3AQ9BRG2 576 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 DPH1Q9BZG8 443 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 ZNF768Q9H5H4 540 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 PLEKHB1Q9UF11 243 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 FBXL5Q9UKA1 691 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 YIPF1Q9Y548 306 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 ASB3Q9Y575 518 aa7.31□□□□□ -1.24
HERPUD1-217ENST00000569429 TMEM150BA6NC51 233 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 ANTXRLA6NF34 631 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 SGK1O00141 431 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 RECQL4O94761 1208 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 C1SP09871 688 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 CHRM1P11229 460 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 TNFRSF8P28908 595 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 GRK6P43250 576 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 EPHB3P54753 998 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 SEC13P55735 322 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 PTENP60484 403 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 LAMTOR4Q0VGL1 99 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 AP3B2Q13367 1082 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 UPP1Q16831 310 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 HLA-BQ31612 363 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 WDR45BQ5MNZ6 344 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 EOGTQ5NDL2 527 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 CC2D1AQ6P1N0 951 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 FBXL19Q6PCT2 694 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 CYB5R4Q7L1T6 521 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 DNAJB7Q7Z6W7 309 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 DHX40Q8IX18 779 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 PGBD3Q8N328 593 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 TXNDC5Q8NBS9 432 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 RNF149Q8NC42 400 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 PRPF31Q8WWY3 499 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 DNASE2BQ8WZ79 361 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 FOXJ1Q92949 421 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 EVI5LQ96CN4 794 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 ZNF578Q96N58 590 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 SEMA3CQ99985 751 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 LZTS2Q9BRK4 669 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 SLC46A2Q9BY10 475 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 SMG9Q9H0W8 520 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 KIF9Q9HAQ2 790 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 SENP2Q9HC62 589 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 RIC8AQ9NPQ8 531 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 GMIPQ9P107 970 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 NFE2L3Q9Y4A8 694 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 CCDC168Q8NDH2 2452 aa7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 NIPBLQ6KC79 2804 aaeCLIP7.3□□□□□ -1.24
HERPUD1-217ENST00000569429 A0A1B0GUA9 196 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 ANO9A1A5B4 782 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 I3L4J1 428 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 ANP32CO43423 234 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 ZNF217O75362 1048 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 NPTXRO95502 500 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 SFNP31947 248 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 BRCC3P46736 316 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 CLCNKBP51801 687 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 JAK3P52333 1124 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 MFAP1P55081 439 aaKnown RBP7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 CLDN6P56747 220 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 BNC1Q01954 994 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 AMHR2Q16671 573 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 HES3Q5TGS1 186 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 SLC27A1Q6PCB7 646 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 RNF19BQ6ZMZ0 732 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 USP49Q70CQ1 688 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 CATIPQ7Z7H3 387 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 EXOC8Q8IYI6 725 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 CMTM8Q8IZV2 173 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 ALLCQ8N6M5 410 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 IL17RCQ8NAC3 791 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 C3orf58Q8NDZ4 430 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 RDM1Q8NG50 284 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 PANK1Q8TE04 598 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 KCNE4Q8WWG9 221 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 USP13Q92995 863 aaPredicted RBP7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 PSMG2Q969U7 264 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 UROC1Q96N76 676 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 DHX33Q9H6R0 707 aaKnown RBP7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 CCL26Q9Y258 94 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 APCP25054 2843 aa7.29□□□□□ -1.24
HERPUD1-217ENST00000569429 A0A1B0GTL3 188 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 TCRBV21S2A2A0A5A6 115 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 ERICH2A1L162 156 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 IFIT3O14879 490 aaKnown RBP7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 TRIM66O15016 1216 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 KLK10O43240 276 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 PCDHGA12O60330 932 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 MARCH6O60337 910 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 ADAM23O75077 832 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 VNN2O95498 520 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms