RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 RPL13P26373 211 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 PSMC2P35998 433 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 PNPLA4P41247 253 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 PIK3CAP42336 1068 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 VAMP7P51809 220 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 TNNC1P63316 161 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 TSPY1Q01534 308 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 POU5F1Q01860 360 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 TAF12Q16514 161 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 SLC5A9Q2M3M2 681 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 SOWAHAQ2M3V2 549 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 ZNF699Q32M78 642 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 PABPC1LQ4VXU2 614 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 C15orf39Q6ZRI6 1047 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 DPH6Q7L8W6 267 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 OTOP3Q7RTS5 596 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 SCN4BQ8IWT1 228 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 C12orf56Q8IXR9 622 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 GPR65Q8IYL9 337 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 ELMOD1Q8N336 334 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 TTC16Q8NEE8 873 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 CMASQ8NFW8 434 aaPredicted RBP9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 OR6B3Q8NGW1 331 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 HDAC7Q8WUI4 952 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 ZNF512Q96ME7 567 aaPredicted RBP9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 GSDMAQ96QA5 445 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 TMEM121BQ9BXQ6 578 aaPredicted RBP9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 ZCWPW1Q9H0M4 648 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 CEP72Q9P209 647 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 AFF4Q9UHB7 1163 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 GTF3C4Q9UKN8 822 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 DSEQ9UL01 958 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 MAGED2Q9UNF1 606 aaPredicted RBP9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 TRAF3IP3Q9Y228 551 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 MRPS23Q9Y3D9 190 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 YIPF1Q9Y548 306 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 ARHGEF37A1IGU5 675 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 MYBPHLA2RUH7 354 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 NRG2O14511 850 aaPredicted RBP9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 CETN3O15182 167 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 GPR37O15354 613 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 NARSO43776 548 aaKnown RBP9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 VNN1O95497 513 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 HLA-DRAP01903 254 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 C4BPAP04003 597 aaKnown RBP9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 CYP11A1P05108 521 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 HNRNPA1P09651 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 EPB41P11171 864 aaKnown RBP9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 CEBPBP17676 345 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 PTPN2P17706 415 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 BMP6P22004 513 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 ALDH1A3P47895 512 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 MYL7Q01449 175 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 CYP27A1Q02318 531 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 PPP3CAQ08209 521 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 IFRD2Q12894 506 aaPredicted RBP9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 GPR17Q13304 367 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 PLD1Q13393 1074 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 STIM1Q13586 685 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 NCOA4Q13772 614 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 UVSSAQ2YD98 709 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 C1orf220Q5T0J3 134 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 TPGS2Q68CL5 300 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 IQCEQ6IPM2 695 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 CENPPQ6IPU0 288 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 TCEAL8Q8IYN2 117 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 ADSSL1Q8N142 457 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 LRRC52Q8N7C0 313 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 NELFBQ8WX92 580 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 KXD1Q9BQD3 176 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 RPP25Q9BUL9 199 aaKnown RBP9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 SNX25Q9H3E2 840 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 DPEP3Q9H4B8 488 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 SMYD3Q9H7B4 428 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 NME7Q9Y5B8 376 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 DENND4AQ7Z401 1863 aa9.67□□□□□ -0.86
GTF3C1-210ENST00000569394 PPP1R3GB7ZBB8 358 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 PI4K2BG5E9Z4 385 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 PSMA7O14818 248 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 CFHP08603 1231 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 ALADP13716 330 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 CD58P19256 250 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 CYP2F1P24903 491 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 GNL1P36915 607 aaPredicted RBP9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 CCR2P41597 374 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 EPHB3P54753 998 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 LRMPQ12912 555 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 MTMR3Q13615 1198 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 MORC3Q14149 939 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 MYBPC2Q14324 1141 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 TEAD2Q15562 447 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 DDR2Q16832 855 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 CCDC40Q4G0X9 1142 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 ZCWPW2Q504Y3 356 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 ZNF667Q5HYK9 610 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 MDH1BQ5I0G3 518 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 INTS6LQ5JSJ4 861 aaKnown RBP9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 CYP4A22Q5TCH4 519 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 POTEHQ6S545 545 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms