RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 HOXA2O43364 376 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 MTA2O94776 668 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 SSTR3P32745 418 aaPredicted RBP13.39□□□□□ -0.27
GGA2-213ENST00000568922 GNL1P36915 607 aaPredicted RBP13.39□□□□□ -0.27
GGA2-213ENST00000568922 AARSP49588 968 aaKnown RBP eCLIP13.39□□□□□ -0.274e-6■■■■□ 24
GGA2-213ENST00000568922 LIN9Q5TKA1 542 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 PAPD7Q5XG87 772 aaKnown RBP13.39□□□□□ -0.27
GGA2-213ENST00000568922 TMEM86AQ8N2M4 240 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 PDCL2Q8N4E4 241 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 RSPH1Q8WYR4 309 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 SENP8Q96LD8 212 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 ADAM22Q9P0K1 906 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 CTTNBP2NLQ9P2B4 639 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 CNOT8Q9UFF9 292 aaKnown RBP13.39□□□□□ -0.27
GGA2-213ENST00000568922 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.39□□□□□ -0.27
GGA2-213ENST00000568922 O00370 1275 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 ENC1O14682 589 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 ATP1A1P05023 1023 aaKnown RBP13.39□□□□□ -0.27
GGA2-213ENST00000568922 FGFR1P11362 822 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 LCLAT1Q6UWP7 414 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 ACOT1Q86TX2 421 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 ABI1Q8IZP0 508 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 CRYBG2Q8N1P7 616 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 LRRC57Q8N9N7 239 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 TNIP3Q96KP6 325 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 OSGEPQ9NPF4 335 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 PRDM10Q9NQV6 1147 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 CACNG4Q9UBN1 327 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 STXBP5LQ9Y2K9 1186 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 NME7Q9Y5B8 376 aa13.39□□□□□ -0.27
GGA2-213ENST00000568922 MICAL3Q7RTP6 2002 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 FAM170AA1A519 330 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 ARHGEF37A1IGU5 675 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 RIOK3O14730 519 aaKnown RBP13.38□□□□□ -0.27
GGA2-213ENST00000568922 B3GAT3O94766 335 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 MICAL2O94851 1124 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 CALB1P05937 261 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 MMP8P22894 467 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 DSC1Q08554 894 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 TCTN1Q2MV58 587 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 ARHGAP17Q68EM7 881 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 DENND1BQ6P3S1 775 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 CNKSR3Q6P9H4 555 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 DEFB128Q7Z7B8 93 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 SLFN11Q7Z7L1 901 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 C1orf131Q8NDD1 294 aaKnown RBP13.38□□□□□ -0.27
GGA2-213ENST00000568922 C3orf58Q8NDZ4 430 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 PAAF1Q9BRP4 392 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 C11orf70Q9BRQ4 267 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 NUP85Q9BW27 656 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 TBC1D13Q9NVG8 400 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 MRFAP1Q9Y605 127 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 SAR1BQ9Y6B6 198 aa13.38□□□□□ -0.27
GGA2-213ENST00000568922 TSC2P49815 1807 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.37□□□□□ -0.27
GGA2-213ENST00000568922 M0QYV0 167 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 GABRDO14764 452 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 ODC1P11926 461 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 PRLRP16471 622 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 LHX1P48742 406 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 TERF1P54274 439 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 AMPD2Q01433 879 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 RNASELQ05823 741 aaKnown RBP13.37□□□□□ -0.27
GGA2-213ENST00000568922 PTP4A2Q12974 167 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 IKBKEQ14164 716 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 MEI1Q5TIA1 1274 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 WSCD1Q658N2 575 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 MMS22LQ6ZRQ5 1243 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 DAAM2Q86T65 1068 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 ERICH1Q86X53 443 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 NPAS4Q8IUM7 802 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 WDTC1Q8N5D0 677 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 ZNF564Q8TBZ8 553 aaPredicted RBP13.37□□□□□ -0.27
GGA2-213ENST00000568922 UBE2Q2Q8WVN8 375 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 FAM193BQ96PV7 902 aaPredicted RBP13.37□□□□□ -0.27
GGA2-213ENST00000568922 MRPL47Q9HD33 250 aaKnown RBP13.37□□□□□ -0.27
GGA2-213ENST00000568922 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 TSPAN16Q9UKR8 245 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 DSEQ9UL01 958 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 STRIP2Q9ULQ0 834 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 COG5Q9UP83 839 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 SCINQ9Y6U3 715 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 TET1Q8NFU7 2136 aa13.37□□□□□ -0.27
GGA2-213ENST00000568922 TMEM189-UBE2V1I3L0A0 370 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 KIAA0355O15063 1070 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
GGA2-213ENST00000568922 DDHD2O94830 711 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 TIMP1P01033 207 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 PDGFRBP09619 1106 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 RRM1P23921 792 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 LMO2P25791 158 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 TIGD5Q53EQ6 642 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 C11orf63Q6NUN7 778 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 OSTM1Q86WC4 334 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 COLGALT2Q8IYK4 626 aa13.36□□□□□ -0.27
GGA2-213ENST00000568922 CRIPAKQ8N1N5 446 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms