RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	AGTPBP1	Q9UPW5	1226 aa		13.37	□□□□□ -0.27
PKM-222	ENST00000568883	IVNS1ABP	Q9Y6Y0	642 aa		13.37	□□□□□ -0.27
PKM-222	ENST00000568883	SI	P14410	1827 aa		13.37	□□□□□ -0.27
PKM-222	ENST00000568883	LRRD1	A4D1F6	860 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	VGLL3	A8MV65	326 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	PI4K2B	G5E9Z4	385 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	FAM189A1	O60320	539 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	IL18RAP	O95256	599 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	BRD2	P25440	801 aa	Known RBP	13.36	□□□□□ -0.27
PKM-222	ENST00000568883	CNTN2	Q02246	1040 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	GPS1	Q13098	491 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	TMED2	Q15363	201 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	PPP1R15B	Q5SWA1	713 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	CYP4F22	Q6NT55	531 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	MPZL3	Q6UWV2	235 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	PCYT2	Q99447	389 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.36	□□□□□ -0.27	3e-6	■□□□□ 9.4
PKM-222	ENST00000568883	KLHL14	Q9P2G3	628 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	FETUB	Q9UGM5	382 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	PRPF4	O43172	522 aa	Known RBP eCLIP	13.36	□□□□□ -0.27	5e-7	■■□□□ 11.4
PKM-222	ENST00000568883	MGRN1	O60291	552 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	B4GALT4	O60513	344 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	GJB6	O95452	261 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	CST3	P01034	146 aa	Predicted RBP	13.36	□□□□□ -0.27
PKM-222	ENST00000568883	KRT10	P13645	584 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	SSTR3	P32745	418 aa	Predicted RBP	13.36	□□□□□ -0.27
PKM-222	ENST00000568883	CDKN2B	P42772	138 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	SLC26A2	P50443	739 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	TFAM	Q00059	246 aa	Known RBP	13.36	□□□□□ -0.27
PKM-222	ENST00000568883	PLCB3	Q01970	1234 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	LAMTOR4	Q0VGL1	99 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	OASL	Q15646	514 aa	Known RBP	13.36	□□□□□ -0.27
PKM-222	ENST00000568883	SPRED3	Q2MJR0	410 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	TSHZ1	Q6ZSZ6	1077 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	PLPPR4	Q7Z2D5	763 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	THNSL1	Q8IYQ7	743 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	SMC6	Q96SB8	1091 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	FAM118B	Q9BPY3	351 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	KLHL11	Q9NVR0	708 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	EURL	Q9NYK6	297 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	TBK1	Q9UHD2	729 aa		13.36	□□□□□ -0.27
PKM-222	ENST00000568883	RLF	Q13129	1914 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.35	□□□□□ -0.27
PKM-222	ENST00000568883	LOC285556	D6RIA3	1793 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883		F8VP50	259 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	SGK1	O00141	431 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	NOP56	O00567	594 aa	Known RBP	13.35	□□□□□ -0.27
PKM-222	ENST00000568883	ALOX15B	O15296	676 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	EDN1	P05305	212 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	KRT3	P12035	628 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	PECAM1	P16284	738 aa	Predicted RBP	13.35	□□□□□ -0.27
PKM-222	ENST00000568883	PSMA2	P25787	234 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	TNFSF9	P41273	254 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	GSC	P56915	257 aa	Predicted RBP	13.35	□□□□□ -0.27
PKM-222	ENST00000568883	ZNF252P-AS1	Q0IIN9	211 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	ACVR2B	Q13705	512 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	SPARCL1	Q14515	664 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	ACAP1	Q15027	740 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	MTFR1	Q15390	333 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	TMEM132A	Q24JP5	1023 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	SEZ6	Q53EL9	994 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	RNF43	Q68DV7	783 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	RPAIN	Q86UA6	219 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	RNF149	Q8NC42	400 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.35	□□□□□ -0.27	4e-24	■□□□□ 10.9
PKM-222	ENST00000568883	GDAP1	Q8TB36	358 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	MAML1	Q92585	1016 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	VPS37B	Q9H9H4	285 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	RXFP1	Q9HBX9	757 aa		13.35	□□□□□ -0.27
PKM-222	ENST00000568883	SIGLEC16	A6NMB1	481 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	ACKR2	O00590	384 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	LGR5	O75473	907 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	SRGAP2C	P0DJJ0	459 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	EZR	P15311	586 aa	Known RBP	13.34	□□□□□ -0.27
PKM-222	ENST00000568883	TSHR	P16473	764 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	GBP2	P32456	591 aa	Predicted RBP	13.34	□□□□□ -0.27
PKM-222	ENST00000568883	ARL4C	P56559	192 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	CCDC15	Q0P6D6	951 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	RIPK1	Q13546	671 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	FAM133B	Q5BKY9	247 aa	Known RBP	13.34	□□□□□ -0.27
PKM-222	ENST00000568883	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.34	□□□□□ -0.27
PKM-222	ENST00000568883	WDR78	Q5VTH9	848 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	TRABD2A	Q86V40	505 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	NCAPG2	Q86XI2	1143 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	CYP4X1	Q8N118	509 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	PWWP2A	Q96N64	755 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.34	□□□□□ -0.27
PKM-222	ENST00000568883	MTFR1L	Q9H019	292 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	SYNC	Q9H7C4	482 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	SSU72	Q9NP77	194 aa	Known RBP	13.34	□□□□□ -0.27
PKM-222	ENST00000568883	GGA3	Q9NZ52	723 aa		13.34	□□□□□ -0.27
PKM-222	ENST00000568883	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.34	□□□□□ -0.27
PKM-222	ENST00000568883	COL11A1	P12107	1806 aa	Predicted RBP	13.34	□□□□□ -0.27
PKM-222	ENST00000568883	IGKV6-21	A0A0C4DH24	114 aa		13.33	□□□□□ -0.27
PKM-222	ENST00000568883	SLC25A27	O95847	323 aa		13.33	□□□□□ -0.27
PKM-222	ENST00000568883	WEE2	P0C1S8	567 aa		13.33	□□□□□ -0.27
PKM-222	ENST00000568883	P4HA1	P13674	534 aa		13.33	□□□□□ -0.27
PKM-222	ENST00000568883	CD19	P15391	556 aa		13.33	□□□□□ -0.27
PKM-222	ENST00000568883	CREB1	P16220	341 aa		13.33	□□□□□ -0.27
PKM-222	ENST00000568883	KRT15	P19012	456 aa		13.33	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms