RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 CALR3Q96L12 384 aaKnown RBP12.84□□□□□ -0.35
TMEM170A-205ENST00000568559 RAB17Q9H0T7 212 aa12.84□□□□□ -0.35
TMEM170A-205ENST00000568559 CDHR5Q9HBB8 845 aa12.84□□□□□ -0.35
TMEM170A-205ENST00000568559 ARFGEF1Q9Y6D6 1849 aa12.84□□□□□ -0.35
TMEM170A-205ENST00000568559 E7EVH7 732 aa12.84□□□□□ -0.35
TMEM170A-205ENST00000568559 KIAA0754O94854 1291 aa12.84□□□□□ -0.35
TMEM170A-205ENST00000568559 SAT1P21673 171 aa12.84□□□□□ -0.35
TMEM170A-205ENST00000568559 CCDC89Q8N998 374 aa12.84□□□□□ -0.35
TMEM170A-205ENST00000568559 C18orf25Q96B23 403 aaPredicted RBP12.84□□□□□ -0.35
TMEM170A-205ENST00000568559 MS4A14Q96JA4 679 aa12.84□□□□□ -0.35
TMEM170A-205ENST00000568559 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 CYBAP13498 195 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 COMTP21964 271 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 ELF1P32519 619 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 SLC7A5Q01650 507 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 SLC10A6Q3KNW5 377 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 PPP6R3Q5H9R7 873 aaPredicted RBP12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 SYCP2LQ5T4T6 812 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 PLEKHO2Q8TD55 490 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 MGARPQ8TDB4 240 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 MICAL1Q8TDZ2 1067 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 RNF139Q8WU17 664 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 RSAD2Q8WXG1 361 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 FBXL18Q96ME1 805 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 ZFP42Q96MM3 310 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 UBN1Q9NPG3 1134 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 TMEM51Q9NW97 253 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 TAS2R14Q9NYV8 317 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 WDR35Q9P2L0 1181 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 PASKQ96RG2 1323 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 IGKV6-21A0A0C4DH24 114 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 ODC1P11926 461 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 RAG1P15918 1043 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 ACAT1P24752 427 aaKnown RBP12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 CLEC16AQ2KHT3 1053 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 SPATA2LQ8IUW3 424 aaPredicted RBP12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 WNT8AQ9H1J5 351 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 CCDC66A2RUB6 948 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 HEXIM1O94992 359 aaKnown RBP12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 RHOT1Q8IXI2 618 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 HELQQ8TDG4 1101 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 GOLGA2P5Q9HBQ8 144 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 KIAA1257Q9ULG3 409 aa12.83□□□□□ -0.36
TMEM170A-205ENST00000568559 GRIK1P39086 918 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 C4orf50Q6ZRC1 276 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 C1orf127Q8N9H9 656 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 ZNF516Q92618 1163 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 SMARCAL1Q9NZC9 954 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 UMODL1Q5DID0 1318 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 SMIM28A0A1B0GU29 152 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 RCCD1A6NED2 376 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 SEC31AO94979 1220 aaKnown RBP12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 ADCY8P40145 1251 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 TAP1Q03518 808 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 LNX1Q8TBB1 728 aaPredicted RBP12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 EPB41L5Q9HCM4 733 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 CHST12Q9NRB3 414 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 TUBGCP4Q9UGJ1 667 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 PAPPA2Q9BXP8 1791 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 RASSF10A6NK89 507 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 ALDH7A1P49419 539 aaKnown RBP12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 CC2D1AQ6P1N0 951 aaPredicted RBP12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 HDXQ7Z353 690 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 ZC3H3Q8IXZ2 948 aaKnown RBP12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 EFCAB13Q8IY85 973 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 FEZF2Q8TBJ5 459 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 KAT2BQ92831 832 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 DDX27Q96GQ7 796 aaKnown RBP12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 SIX2Q9NPC8 291 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 KLHL11Q9NVR0 708 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 FOCADQ5VW36 1801 aa12.82□□□□□ -0.36
TMEM170A-205ENST00000568559 H7C0C1 242 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 PODXLO00592 558 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 ARHGAP25P42331 645 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 ATP5OP48047 213 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 BCAR1P56945 870 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 HGSNATQ68CP4 663 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 ADAM33Q9BZ11 813 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 KIF13BQ9NQT8 1826 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 HSPA6P17066 643 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 HP1BP3Q5SSJ5 553 aaPredicted RBP12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 CFAP58Q5T655 872 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 RNPC3Q96LT9 517 aaKnown RBP12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 STRA6Q9BX79 667 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 FAM204AQ9H8W3 233 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 DDX43Q9NXZ2 648 aaKnown RBP12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 TSPAN16Q9UKR8 245 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 PI4K2BG5E9Z4 385 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 ARL4AP40617 200 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 DENND2CQ68D51 928 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 USP38Q8NB14 1042 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 GRK7Q8WTQ7 553 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 COG1Q8WTW3 980 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 COLEC11Q9BWP8 271 aa12.81□□□□□ -0.36
TMEM170A-205ENST00000568559 PARD6BQ9BYG5 372 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms