RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 TWF1Q12792 350 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 MYO1EQ12965 1108 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 PNOCQ13519 176 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 NFE2Q16621 373 aaPredicted RBP8.79□□□□□ -1
HDGFL3-205ENST00000568129 ZACNQ401N2 412 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 LMBRD2Q68DH5 695 aaPredicted RBP8.79□□□□□ -1
HDGFL3-205ENST00000568129 HFE2Q6ZVN8 426 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 MTSS1LQ765P7 747 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 OSTM1Q86WC4 334 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 NPAS3Q8IXF0 933 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 DCP1BQ8IZD4 617 aaKnown RBP8.79□□□□□ -1
HDGFL3-205ENST00000568129 ATAD1Q8NBU5 361 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 ZNF512Q96ME7 567 aaPredicted RBP8.79□□□□□ -1
HDGFL3-205ENST00000568129 FNBP1Q96RU3 617 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 MKNK1Q9BUB5 465 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 TMLHEQ9NVH6 421 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 RMND1Q9NWS8 449 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 CHMP5Q9NZZ3 219 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 YIPF1Q9Y548 306 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 NME7Q9Y5B8 376 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 PCDHA5Q9Y5H7 936 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 SNX9Q9Y5X1 595 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 FANCMQ8IYD8 2048 aa8.79□□□□□ -1
HDGFL3-205ENST00000568129 HELZP42694 1942 aaKnown RBP8.79□□□□□ -1
HDGFL3-205ENST00000568129 F5P12259 2224 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 WDFY4Q6ZS81 3184 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 PATJQ8NI35 1801 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 GOLGA6L4A6NEF3 574 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 GADD45BO75293 160 aaPredicted RBP8.78□□□□□ -1
HDGFL3-205ENST00000568129 ECI2O75521 394 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 AKAP3O75969 853 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 VNN1O95497 513 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 DLATP10515 647 aaKnown RBP8.78□□□□□ -1
HDGFL3-205ENST00000568129 SRFP11831 508 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 ATF6P18850 670 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 COL9A1P20849 921 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 LMO2P25791 158 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 RPL13P26373 211 aaKnown RBP8.78□□□□□ -1
HDGFL3-205ENST00000568129 PCSK1P29120 753 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 PRCPP42785 496 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 MAGEA11P43364 429 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 NUBP1P53384 320 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 EPHB3P54753 998 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 DLG4P78352 724 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 CFAP221Q4G0U5 840 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 SLC39A12Q504Y0 691 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 INTS6LQ5JSJ4 861 aaKnown RBP8.78□□□□□ -1
HDGFL3-205ENST00000568129 CYP4A22Q5TCH4 519 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 TDRD10Q5VZ19 366 aaKnown RBP8.78□□□□□ -1
HDGFL3-205ENST00000568129 PARM1Q6UWI2 310 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 GAREM2Q75VX8 874 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 GET4Q7L5D6 327 aaPredicted RBP8.78□□□□□ -1
HDGFL3-205ENST00000568129 DNAJB7Q7Z6W7 309 aaPredicted RBP8.78□□□□□ -1
HDGFL3-205ENST00000568129 ADGRF2Q8IZF7 708 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 FBXL6Q8N531 539 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 TTC9BQ8N6N2 239 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 RSAD2Q8WXG1 361 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 TAF4BQ92750 862 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 FGF14Q92915 247 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 SYAP1Q96A49 352 aaPredicted RBP8.78□□□□□ -1
HDGFL3-205ENST00000568129 TCEAL4Q96EI5 215 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 FUBP3Q96I24 572 aaKnown RBP eCLIP8.78□□□□□ -1
HDGFL3-205ENST00000568129 FAXDC2Q96IV6 333 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 RPP25Q9BUL9 199 aaKnown RBP8.78□□□□□ -1
HDGFL3-205ENST00000568129 GPR88Q9GZN0 384 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 SMOC2Q9H3U7 446 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 IL21Q9HBE4 155 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 DDX43Q9NXZ2 648 aaKnown RBP8.78□□□□□ -1
HDGFL3-205ENST00000568129 CDH9Q9ULB4 789 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 FRMD4BQ9Y2L6 1034 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 NUMBLQ9Y6R0 609 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 CACNA1IQ9P0X4 2223 aa8.78□□□□□ -1
HDGFL3-205ENST00000568129 PMM2O15305 246 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 SMC2O95347 1197 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 FGF19O95750 216 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 ASS1P00966 412 aaKnown RBP8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 KRT19P08727 400 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 HMGA1P17096 107 aaKnown RBP8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 NPR3P17342 541 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 CEBPBP17676 345 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 BMP6P22004 513 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 FCARP24071 287 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 NR2F2P24468 414 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 GTF2H1P32780 548 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 PPP1R2P41236 205 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 ALDH1A3P47895 512 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 CLCN5P51795 746 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 VAMP7P51809 220 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 MYL6P60660 151 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 MYL7Q01449 175 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 BFSP1Q12934 665 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 ADAM9Q13443 819 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 MAPRE1Q15691 268 aaKnown RBP8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 SGSM1Q2NKQ1 1148 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 IQCEQ6IPM2 695 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 INTS8Q75QN2 995 aaKnown RBP8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 SV2AQ7L0J3 742 aa8.77□□□□□ -1.01
HDGFL3-205ENST00000568129 TMEM150AQ86TG1 271 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms