RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 EPHB2P29323 1055 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 PIK3CGP48736 1102 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 TUBA4AP68366 448 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 TFF2Q03403 129 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 PCBP2Q15366 365 aaKnown RBP eCLIP4.33□□□□□ -1.72
CDH1-211ENST00000567320 TEDDM1Q5T9Z0 273 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 C3orf20Q8ND61 904 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 KLHDC4Q8TBB5 520 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 NSUN6Q8TEA1 469 aaKnown RBP4.33□□□□□ -1.72
CDH1-211ENST00000567320 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
CDH1-211ENST00000567320 ZBTB9Q96C00 473 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 FCRL4Q96PJ5 515 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 DMRTA2Q96SC8 542 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 C1orf43Q9BWL3 253 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 BHMT2Q9H2M3 363 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 SERTAD4Q9NUC0 356 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 MRPS18AQ9NVS2 196 aaKnown RBP4.33□□□□□ -1.72
CDH1-211ENST00000567320 SERGEFQ9UGK8 458 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 TBC1D30Q9Y2I9 924 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.33□□□□□ -1.72
CDH1-211ENST00000567320 PCDHGA9Q9Y5G4 932 aaKnown RBP4.33□□□□□ -1.72
CDH1-211ENST00000567320 PCDHGA8Q9Y5G5 932 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 PCDHGA7Q9Y5G6 932 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 PCDHGA6Q9Y5G7 932 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 PCDHGA3Q9Y5H0 932 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 PCDHA3Q9Y5H8 950 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 SHTN1A0MZ66 631 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 TP73O15350 636 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 RARBP10826 455 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 POU3F3P20264 500 aaPredicted RBP4.32□□□□□ -1.72
CDH1-211ENST00000567320 CERS1P27544 350 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 CYP2C18P33260 490 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 GUCY2FP51841 1108 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 KLF9Q13886 244 aaPredicted RBP4.32□□□□□ -1.72
CDH1-211ENST00000567320 INAVAQ3KP66 663 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 SLC44A4Q53GD3 710 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 VPS53Q5VIR6 699 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 PRAMEF17Q5VTA0 474 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 MIER2Q8N344 545 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
CDH1-211ENST00000567320 DENND1AQ8TEH3 1009 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 SEMA4CQ9C0C4 833 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 CCDC8Q9H0W5 538 aaPredicted RBP4.32□□□□□ -1.72
CDH1-211ENST00000567320 RLIMQ9NVW2 624 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 ETAA1Q9NY74 926 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 SERPINB13Q9UIV8 391 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 CCNL1Q9UK58 526 aaPredicted RBP4.32□□□□□ -1.72
CDH1-211ENST00000567320 ATP8A1Q9Y2Q0 1164 aa4.32□□□□□ -1.72
CDH1-211ENST00000567320 M0QYG6 137 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 GCLCP48506 637 aaPredicted RBP4.31□□□□□ -1.72
CDH1-211ENST00000567320 PDE1AP54750 535 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 FAM50AQ14320 339 aaKnown RBP4.31□□□□□ -1.72
CDH1-211ENST00000567320 PCID2Q5JVF3 399 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 ZNF618Q5T7W0 954 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 SLC9A4Q6AI14 798 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 SLC18B1Q6NT16 456 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 LAYNQ6UX15 382 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 TMEM108Q6UXF1 575 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 ZNF804AQ7Z570 1209 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 NEK8Q86SG6 692 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 CNGA4Q8IV77 575 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 CPA6Q8N4T0 437 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 QTRT1Q9BXR0 403 aaKnown RBP4.31□□□□□ -1.72
CDH1-211ENST00000567320 TINAGL1Q9GZM7 467 aaPredicted RBP4.31□□□□□ -1.72
CDH1-211ENST00000567320 TMX1Q9H3N1 280 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 SPC25Q9HBM1 224 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 AGAP1Q9UPQ3 857 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 POLHQ9Y253 713 aa4.31□□□□□ -1.72
CDH1-211ENST00000567320 NT5C1B-RDH14C9J2C7 533 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 PPP6CO00743 305 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 ARIH2O95376 493 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 JUPP14923 745 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 MMP13P45452 471 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 CLCN2P51788 898 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 EEFSECP57772 596 aaKnown RBP4.3□□□□□ -1.72
CDH1-211ENST00000567320 PTPN21Q16825 1174 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 CCDC157Q569K6 752 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 MORN5Q5VZ52 161 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 SLC2A7Q6PXP3 512 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 NAPRTQ6XQN6 538 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 ZNF66Q6ZN08 573 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 USP37Q86T82 979 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 LRRC71Q8N4P6 559 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 C9orf106Q8NAJ2 232 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 PCSK9Q8NBP7 692 aaKnown RBP4.3□□□□□ -1.72
CDH1-211ENST00000567320 TBC1D5Q92609 795 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 PUS7Q96PZ0 661 aaKnown RBP4.3□□□□□ -1.72
CDH1-211ENST00000567320 TTYH3Q9C0H2 523 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 GPR35Q9HC97 309 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 ABCF2Q9UG63 623 aa4.3□□□□□ -1.72
CDH1-211ENST00000567320 FEZ2Q9UHY8 353 aaPredicted RBP4.3□□□□□ -1.72
CDH1-211ENST00000567320 DTNBO60941 627 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 KATNA1O75449 491 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 ENGP17813 658 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 PRDX5P30044 214 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 CCT4P50991 539 aaKnown RBP4.29□□□□□ -1.72
CDH1-211ENST00000567320 PLCD1P51178 756 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 ADKP55263 362 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms