RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 PTPROQ16827 1216 aa18.8■□□□□ 0.6
HERC2-208ENST00000566635 SGO2Q562F6 1265 aa18.8■□□□□ 0.6
HERC2-208ENST00000566635 NOMO2Q5JPE7 1267 aa18.8■□□□□ 0.6
HERC2-208ENST00000566635 NECAB2Q7Z6G3 386 aa18.8■□□□□ 0.6
HERC2-208ENST00000566635 WDTC1Q8N5D0 677 aa18.8■□□□□ 0.6
HERC2-208ENST00000566635 TOP6BLQ8N6T0 577 aa18.8■□□□□ 0.6
HERC2-208ENST00000566635 MCOLN1Q9GZU1 580 aa18.8■□□□□ 0.6
HERC2-208ENST00000566635 CTTNBP2NLQ9P2B4 639 aa18.8■□□□□ 0.6
HERC2-208ENST00000566635 GTF3C4Q9UKN8 822 aa18.8■□□□□ 0.6
HERC2-208ENST00000566635 I3L4J1 428 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 O00370 1275 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 MED7O43513 233 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 MICAL2O94851 1124 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 LSM8O95777 96 aaKnown RBP18.79■□□□□ 0.6
HERC2-208ENST00000566635 FTCDO95954 541 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 MMS22LQ6ZRQ5 1243 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 ZNF280BQ86YH2 543 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 VWCEQ96DN2 955 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 SENP8Q96LD8 212 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 PRDM5Q9NQX1 630 aaPredicted RBP18.79■□□□□ 0.6
HERC2-208ENST00000566635 TBC1D13Q9NVG8 400 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 CNOT8Q9UFF9 292 aaKnown RBP18.79■□□□□ 0.6
HERC2-208ENST00000566635 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.79■□□□□ 0.6
HERC2-208ENST00000566635 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.79■□□□□ 0.6
HERC2-208ENST00000566635 TTC3P53804 2025 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 M0QYV0 167 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 DDHD2O94830 711 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 CYP1A2P05177 515 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 PDGFRBP09619 1106 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 ITGB8P26012 769 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 WSCD1Q658N2 575 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 CD300LGQ6UXG3 332 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 UNC93AQ86WB7 457 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 LRRC57Q8N9N7 239 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 URGCPQ8TCY9 931 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 SNX25Q9H3E2 840 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 ELAC1Q9H777 363 aaKnown RBP18.79■□□□□ 0.6
HERC2-208ENST00000566635 FAM49BQ9NUQ9 324 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 CYTH4Q9UIA0 394 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 PCDHB7Q9Y5E2 793 aa18.79■□□□□ 0.6
HERC2-208ENST00000566635 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
HERC2-208ENST00000566635 ITGB1P05556 798 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 WARSP23381 471 aaKnown RBP18.78■□□□□ 0.6
HERC2-208ENST00000566635 RRM1P23921 792 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 CDH5P33151 784 aaPredicted RBP18.78■□□□□ 0.6
HERC2-208ENST00000566635 GNL1P36915 607 aaPredicted RBP18.78■□□□□ 0.6
HERC2-208ENST00000566635 AMPD2Q01433 879 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 PTP4A2Q12974 167 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 TIGD5Q53EQ6 642 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 DSTYKQ6XUX3 929 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 PHF13Q86YI8 300 aaPredicted RBP18.78■□□□□ 0.6
HERC2-208ENST00000566635 RHOT2Q8IXI1 618 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 TMEM35BQ8NCS4 154 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 NUP85Q9BW27 656 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 L2HGDHQ9H9P8 463 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 ADAM22Q9P0K1 906 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 TSPAN16Q9UKR8 245 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 STXBP5LQ9Y2K9 1186 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 JRKLQ9Y4A0 524 aa18.78■□□□□ 0.6
HERC2-208ENST00000566635 TIMM13Q9Y5L4 95 aaPredicted RBP18.78■□□□□ 0.6
HERC2-208ENST00000566635 TRIM43BA6NCK2 446 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 B3GAT3O94766 335 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 BRCC3P46736 316 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 AARSP49588 968 aaKnown RBP eCLIP18.77■□□□□ 0.64e-6■■■■■ 30.6
HERC2-208ENST00000566635 IFI16Q16666 785 aaKnown RBP18.77■□□□□ 0.6
HERC2-208ENST00000566635 CCDC142Q17RM4 750 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 PPP1R26Q5T8A7 1209 aaPredicted RBP18.77■□□□□ 0.6
HERC2-208ENST00000566635 TRIM43Q96BQ3 446 aaPredicted RBP18.77■□□□□ 0.6
HERC2-208ENST00000566635 LRFN2Q9ULH4 789 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 PACSIN2Q9UNF0 486 aaPredicted RBP18.77■□□□□ 0.6
HERC2-208ENST00000566635 CEP83Q9Y592 693 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 MRFAP1Q9Y605 127 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 BUB1BO60566 1050 aaPredicted RBP18.77■□□□□ 0.6
HERC2-208ENST00000566635 KIF4AO95239 1232 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 MMP8P22894 467 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 ACAT1P24752 427 aaKnown RBP18.77■□□□□ 0.6
HERC2-208ENST00000566635 DSC1Q08554 894 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 GOLGA7BQ2TAP0 167 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 UBA3Q8TBC4 463 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 ZNF564Q8TBZ8 553 aaPredicted RBP18.77■□□□□ 0.6
HERC2-208ENST00000566635 DDX27Q96GQ7 796 aaKnown RBP18.77■□□□□ 0.6
HERC2-208ENST00000566635 UROC1Q96N76 676 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 LHX5Q9H2C1 402 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 DNAJB4Q9UDY4 337 aa18.77■□□□□ 0.6
HERC2-208ENST00000566635 PSMC1P62191 440 aaKnown RBP18.76■□□□□ 0.59
HERC2-208ENST00000566635 RNASELQ05823 741 aaKnown RBP18.76■□□□□ 0.59
HERC2-208ENST00000566635 TCEAL1Q15170 157 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 CNGA2Q16280 664 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 PAPD7Q5XG87 772 aaKnown RBP18.76■□□□□ 0.59
HERC2-208ENST00000566635 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.76■□□□□ 0.596e-6■■■□□ 19.1
HERC2-208ENST00000566635 COLGALT2Q8IYK4 626 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 ABI1Q8IZP0 508 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 CRIPAKQ8N1N5 446 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 BTBD6Q96KE9 485 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 CASD1Q96PB1 797 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 HCSTQ9UBK5 93 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 TJP2Q9UDY2 1190 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 KIAA1257Q9ULG3 409 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 HYOU1Q9Y4L1 999 aa18.76■□□□□ 0.59
HERC2-208ENST00000566635 LTBP2Q14767 1821 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms