RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 TRMT13Q9NUP7 481 aaKnown RBP11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 GRHL1Q9NZI5 618 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 DDX20Q9UHI6 824 aaKnown RBP11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 ATP8A1Q9Y2Q0 1164 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 PTCH2Q9Y6C5 1203 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 TRIP12Q14669 1992 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 MYO1CO00159 1063 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 FKTNO75072 461 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 CYP1A1P04798 512 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 COILP38432 576 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 NFX1Q12986 1120 aaKnown RBP11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 ZNF394Q53GI3 561 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 GLRA4Q5JXX5 417 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 CCSAPQ6IQ19 270 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 WDR49Q8IV35 697 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 KLHDC9Q8NEP7 349 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 FBXO25Q8TCJ0 367 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 CFHR5Q9BXR6 569 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 UPF3AQ9H1J1 476 aaKnown RBP11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 RNF39Q9H2S5 420 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 NXF3Q9H4D5 531 aaKnown RBP11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 KLK14Q9P0G3 267 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 MTUS1Q9ULD2 1270 aa11.48□□□□□ -0.57
PDXDC1-214ENST00000566633 MROH7Q68CQ1 1323 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 MYBL1P10243 752 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 MCF2P10911 925 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 GNAT1P11488 350 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 CD58P19256 250 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 RRM1P23921 792 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 LSP1P33241 339 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 MDH1P40925 334 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 RPL21P46778 160 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 CCT5P48643 541 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 NOP14P78316 857 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 MAP3K21Q5TCX8 1036 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 AGBL2Q5U5Z8 902 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 SCARA5Q6ZMJ2 495 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 C12orf50Q8NA57 414 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 ADPGKQ9BRR6 497 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 EPB41L4BQ9H329 900 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 RABEP2Q9H5N1 569 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 NXF1Q9UBU9 619 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 ANAPC7Q9UJX3 599 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 FSCN2O14926 492 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 WEE2P0C1S8 567 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 GBP1P32455 592 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 CENPCQ03188 943 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 TRPC3Q13507 836 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 CUL2Q13617 745 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 CYFIP2Q96F07 1278 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 RUNDC3BQ96NL0 473 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 ACAP3Q96P50 834 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 TRIM7Q9C029 511 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 TRIM6Q9C030 488 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 LRRC19Q9H756 370 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 CDY2AQ9Y6F7 541 aa11.47□□□□□ -0.57
PDXDC1-214ENST00000566633 ITGB3P05106 788 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 CLTAP09496 248 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 HOXC8P31273 242 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 GRK4P32298 578 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 HPDP32754 393 aaPredicted RBP11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 THPOP40225 353 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 FNTAP49354 379 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 PMS2P54278 862 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 EIF3BP55884 814 aaKnown RBP11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 TMEM270Q6UE05 265 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 CCDC105Q8IYK2 499 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 ARFGAP2Q8N6H7 521 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 C1orf127Q8N9H9 656 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 TRIM11Q96F44 468 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 ZMAT2Q96NC0 199 aaKnown RBP11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 EPN3Q9H201 632 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 PABPC3Q9H361 631 aaKnown RBP11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 LRRC4CQ9HCJ2 640 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 SIX4Q9UIU6 781 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 CNTN6Q9UQ52 1028 aa11.46□□□□□ -0.57
PDXDC1-214ENST00000566633 B4GALT4O60513 344 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 CHRNA1P02708 482 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 CFHP08603 1231 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 NUDT17P0C025 328 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 SLC1A1P43005 524 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 NSFP46459 744 aaKnown RBP11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 CDH8P55286 799 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 PTGISQ16647 500 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 LHX8Q68G74 356 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 MON1BQ7L1V2 547 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 FAM228AQ86W67 206 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 ANKRD36BP1Q96IX9 119 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 PLVAPQ9BX97 442 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 BCCIPQ9P287 314 aaKnown RBP eCLIP11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 PARP2Q9UGN5 583 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 POLIQ9UNA4 740 aa11.46□□□□□ -0.58
PDXDC1-214ENST00000566633 SIP14410 1827 aa11.45□□□□□ -0.58
PDXDC1-214ENST00000566633 MEIS3P2A8K0S8 358 aa11.45□□□□□ -0.58
PDXDC1-214ENST00000566633 EBAG9O00559 213 aa11.45□□□□□ -0.58
PDXDC1-214ENST00000566633 KPNA6O60684 536 aa11.45□□□□□ -0.58
PDXDC1-214ENST00000566633 RAP1GAPP47736 663 aa11.45□□□□□ -0.58
PDXDC1-214ENST00000566633 KCNJ1P48048 391 aa11.45□□□□□ -0.58
PDXDC1-214ENST00000566633 ACLYP53396 1101 aa11.45□□□□□ -0.58
PDXDC1-214ENST00000566633 CRYBB1P53674 252 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms