RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 ASB3Q9Y575 518 aa13.32□□□□□ -0.28
KLHDC4-216ENST00000566561 ATP6V1DQ9Y5K8 247 aa13.32□□□□□ -0.28
KLHDC4-216ENST00000566561 SNX9Q9Y5X1 595 aa13.32□□□□□ -0.28
KLHDC4-216ENST00000566561 R4GN57 208 aa13.32□□□□□ -0.28
KLHDC4-216ENST00000566561 TRIP11Q15643 1979 aa13.32□□□□□ -0.28
KLHDC4-216ENST00000566561 UBE4BO95155 1302 aa13.32□□□□□ -0.28
KLHDC4-216ENST00000566561 FRYLO94915 3013 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 A0A1B0GVL5 298 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 A0A1W2PRU2 124 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 MED19A0JLT2 244 aaPredicted RBP13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 TGFB1I1O43294 461 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 PFKFB1P16118 471 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 CMA1P23946 247 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 TSPY1Q01534 308 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 EHHADHQ08426 723 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 SMARCB1Q12824 385 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 MYO1EQ12965 1108 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 TEAD2Q15562 447 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 TAF12Q16514 161 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 SNRNP35Q16560 246 aaKnown RBP13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 DUOXA2Q1HG44 320 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 SLC44A4Q53GD3 710 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 DNAJB7Q7Z6W7 309 aaPredicted RBP13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 ITIH5Q86UX2 942 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 PDCL2Q8N4E4 241 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 SPPL2BQ8TCT7 592 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 C2orf15Q8WU43 125 aaKnown RBP13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 SCFD1Q8WVM8 642 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 SMARCD2Q92925 531 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 PSMG2Q969U7 264 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 PAGE5Q96GU1 130 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 ZSWIM3Q96MP5 696 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 ASB16Q96NS5 453 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 FNBP1Q96RU3 617 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 GPR88Q9GZN0 384 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 EXOC1Q9NV70 894 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 INTS13Q9NVM9 706 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 ABI2Q9NYB9 513 aaPredicted RBP13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 SIT1Q9Y3P8 196 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 GPR179Q6PRD1 2367 aa13.31□□□□□ -0.28
KLHDC4-216ENST00000566561 DOCK6Q96HP0 2047 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 PDCD11Q14690 1871 aaKnown RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 NRG2O14511 850 aaPredicted RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 ACTN4O43707 911 aaKnown RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 MOSPD3O75425 235 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 FGF19O95750 216 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 DCNP07585 359 aaKnown RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 DLATP10515 647 aaKnown RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 TNNI1P19237 187 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 STARD6P59095 220 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 SNRPFP62306 86 aaKnown RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 MYL7Q01449 175 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 GRM2Q14416 872 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 MLF2Q15773 248 aaPredicted RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 KNOP1Q1ED39 458 aaKnown RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 SCARA3Q6AZY7 606 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 LRRTM3Q86VH5 581 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 TMC8Q8IU68 726 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 WDR49Q8IV35 697 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 ADGRF2Q8IZF7 708 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 TMEM86AQ8N2M4 240 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 XXYLT1Q8NBI6 393 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 OR5B17Q8NGF7 314 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 SHKBP1Q8TBC3 707 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 ZSCAN18Q8TBC5 510 aaPredicted RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 GIPC2Q8TF65 315 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 CCDC127Q96BQ5 260 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 HPDLQ96IR7 371 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 LPIN3Q9BQK8 851 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 TRMT61BQ9BVS5 477 aaKnown RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 LRRC3Q9BY71 257 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 ATXN3LQ9H3M9 355 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 BRD9Q9H8M2 597 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 GDAP2Q9NXN4 497 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 DDX43Q9NXZ2 648 aaKnown RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 CGNQ9P2M7 1197 aaKnown RBP13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 USP25Q9UHP3 1055 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 SIX4Q9UIU6 781 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 L1RE1Q9UN81 338 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 PCDHB5Q9Y5E4 795 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 PTPRJQ12913 1337 aa13.3□□□□□ -0.28
KLHDC4-216ENST00000566561 KANSL1LA0AUZ9 987 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 PRPF40AO75400 957 aaKnown RBP13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 FCARP24071 287 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 ACAT1P24752 427 aaKnown RBP13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 GABRR2P28476 465 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 SYKP43405 635 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 PRKCQQ04759 706 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 PSMD2Q13200 908 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 BECN1Q14457 450 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 NFE2Q16621 373 aaPredicted RBP13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 BMT2Q1RMZ1 405 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 KMT5BQ4FZB7 885 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 ARHGAP15Q53QZ3 475 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 PJA1Q8NG27 643 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 CXorf38Q8TB03 319 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 RUBCNQ92622 972 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 GCNAQ96QF7 691 aa13.29□□□□□ -0.28
KLHDC4-216ENST00000566561 ACBD6Q9BR61 282 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms