RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 DNAI1Q9UI46 699 aa10.45□□□□□ -0.74
SF3B3-207ENST00000566095 CDH9Q9ULB4 789 aa10.45□□□□□ -0.74
SF3B3-207ENST00000566095 POLIQ9UNA4 740 aa10.45□□□□□ -0.74
SF3B3-207ENST00000566095 JRKLQ9Y4A0 524 aa10.45□□□□□ -0.74
SF3B3-207ENST00000566095 TRIP11Q15643 1979 aa10.45□□□□□ -0.74
SF3B3-207ENST00000566095 CTAGE9A4FU28 777 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ANKRD62A6NC57 917 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 OR6C75A6NL08 312 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 NRP1O14786 923 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 GJB5O95377 273 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 H2AFZP0C0S5 128 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 TMEM253P0C7T8 217 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 SETSIPP0DME0 302 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ATP2A2P16615 1042 aaKnown RBP10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ACO1P21399 889 aaKnown RBP10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ITGB8P26012 769 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 CASQ1P31415 396 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 NSFP46459 744 aaKnown RBP10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ZNF132P52740 706 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 NDST1P52848 882 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 GNG11P61952 73 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 APBA1Q02410 837 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 YWHAHQ04917 246 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-207ENST00000566095 GOLGA8FQ08AF8 430 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 GOLGA8DPQ0D2H9 430 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 SOWAHAQ2M3V2 549 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 PAPD7Q5XG87 772 aaKnown RBP10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ZNF280DQ6N043 979 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 C4orf50Q6ZRC1 276 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ANKS3Q6ZW76 656 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 H2AFVQ71UI9 128 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 RHOT2Q8IXI1 618 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 SYCE1Q8N0S2 351 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 PDCL2Q8N4E4 241 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 UBR7Q8N806 425 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 TMEM35BQ8NCS4 154 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 KAT5Q92993 513 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 SECISBP2LQ93073 1101 aaKnown RBP10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ZNF689Q96CS4 500 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-207ENST00000566095 SAMD11Q96NU1 681 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ARID3AQ99856 593 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ACBD6Q9BR61 282 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 NRDE2Q9H7Z3 1164 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ADAMTS1Q9UHI8 967 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 ZMYND8Q9ULU4 1186 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-207ENST00000566095 PCDHGC3Q9UN70 934 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 STXBP5LQ9Y2K9 1186 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 PCDHGC5Q9Y5F6 944 aa10.44□□□□□ -0.74
SF3B3-207ENST00000566095 A0A087X0T9 212 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 ZNF263O14978 683 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 CTIFO43310 598 aaKnown RBP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 TLL1O43897 1013 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 MTA2O94776 668 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 DDHD2O94830 711 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 GALTP07902 379 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 FAM228BP0C875 321 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 SYN1P17600 705 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 BCAR1P56945 870 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 CNGA2Q16280 664 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 WHAMMP3Q1A5X7 153 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 USP41Q3LFD5 358 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 PAN2Q504Q3 1202 aaKnown RBP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 ZNF394Q53GI3 561 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 LIN9Q5TKA1 542 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 OVOS1Q6IE37 1185 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 KIAA1841Q6NSI8 718 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 SYT10Q6XYQ8 523 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 ZNF571Q7Z3V5 609 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 LIMS2Q7Z4I7 341 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 SLC47A2Q86VL8 602 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 GPR65Q8IYL9 337 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 CRYBG2Q8N1P7 616 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 ACRBPQ8NEB7 543 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 IPO4Q8TEX9 1081 aaKnown RBP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 ZNF606Q8WXB4 792 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 CTNNBL1Q8WYA6 563 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 NAPGQ99747 312 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 DESI2Q9BSY9 194 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 LHX5Q9H2C1 402 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 DDX43Q9NXZ2 648 aaKnown RBP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 SPG21Q9NZD8 308 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 NOCTQ9UK39 431 aaKnown RBP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 AJAP1Q9UKB5 411 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 STRIP2Q9ULQ0 834 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 L1RE1Q9UN81 338 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 PRG3Q9Y2Y8 225 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-207ENST00000566095 DNAH12Q6ZR08 3092 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 TET1Q8NFU7 2136 aa10.43□□□□□ -0.74
SF3B3-207ENST00000566095 COL4A6Q14031 1691 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 GABRDO14764 452 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 PPEF2O14830 753 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 LPXNO60711 386 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 RTN2O75298 545 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 CALB1P05937 261 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 TCP1P17987 556 aaKnown RBP10.42□□□□□ -0.74
SF3B3-207ENST00000566095 RAP1GAPP47736 663 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 SLC11A1P49279 550 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 AFF1P51825 1210 aaKnown RBP10.42□□□□□ -0.74
SF3B3-207ENST00000566095 BCAT1P54687 386 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms