RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 HEXIM2Q96MH2 286 aaKnown RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 EMILIN2Q9BXX0 1053 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 PDCL3Q9H2J4 239 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 ENTPD7Q9NQZ7 604 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 CHST7Q9NS84 486 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 AJAP1Q9UKB5 411 aaPredicted RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 COLQQ9Y215 455 aaPredicted RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 STXBP5LQ9Y2K9 1186 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 BZW2Q9Y6E2 419 aaKnown RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 MICAL3Q7RTP6 2002 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 H3BNC9 293 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 C2CD2LO14523 706 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 CYP26A1O43174 497 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 MED7O43513 233 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 MFAP3LO75121 409 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 ARHGEF15O94989 841 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 EFEMP2O95967 443 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 VDRP11473 427 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 PTPN1P18031 435 aaKnown RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 ACAT1P24752 427 aaKnown RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 GNA15P30679 374 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 HOXD11P31277 338 aaPredicted RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 PDE6CP51160 858 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 RAD23BP54727 409 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 ARID5AQ03989 594 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 KLHL30Q0D2K2 578 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 SMARCB1Q12824 385 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 MRPL58Q14197 206 aaKnown RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 SMC1AQ14683 1233 aaKnown RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 STILQ15468 1287 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 NFE2Q16621 373 aaPredicted RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 PTPROQ16827 1216 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 SGO2Q562F6 1265 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 INTS6LQ5JSJ4 861 aaKnown RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 RTP2Q5QGT7 225 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 KIAA0319Q5VV43 1072 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 PDE12Q6L8Q7 609 aaKnown RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 C4orf50Q6ZRC1 276 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 CCDC186Q7Z3E2 898 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 ACOT1Q86TX2 421 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 VPS36Q86VN1 386 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 RNF168Q8IYW5 571 aaPredicted RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 CRYBG2Q8N1P7 616 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 UBR7Q8N806 425 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 LNX1Q8TBB1 728 aaPredicted RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 PIK3R5Q8WYR1 880 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 B3GALT6Q96L58 329 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 TCF25Q9BQ70 676 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 SYT15Q9BQS2 421 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 GPR88Q9GZN0 384 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 ELOVL4Q9GZR5 314 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 LMAN2LQ9H0V9 348 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 ZBP1Q9H171 429 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 CERS4Q9HA82 394 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 ALG13Q9NP73 1137 aaKnown RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 TLR9Q9NR96 1032 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 ABHD10Q9NUJ1 306 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 AIPL1Q9NZN9 384 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 CNTN6Q9UQ52 1028 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 BACE2Q9Y5Z0 518 aa8.29□□□□□ -1.08
CDH1-208ENST00000565810 RANBP2P49792 3224 aaKnown RBP8.29□□□□□ -1.08
CDH1-208ENST00000565810 LAMA3Q16787 3333 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 LAMA2P24043 3122 aaKnown RBP8.28□□□□□ -1.08
CDH1-208ENST00000565810 TMEM265A0A087WTH1 108 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.28□□□□□ -1.08
CDH1-208ENST00000565810 RNF225M0QZC1 329 aaPredicted RBP8.28□□□□□ -1.08
CDH1-208ENST00000565810 GRM6O15303 877 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 THAP12O43422 761 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 SERPING1P05155 500 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 PNMA6AP0CW24 399 aaPredicted RBP8.28□□□□□ -1.08
CDH1-208ENST00000565810 CPB1P15086 417 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 CYP11B1P15538 503 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 CLCN1P35523 988 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 ZNF132P52740 706 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 ARPP19P56211 112 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 SLC8A3P57103 927 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 PSMC1P62191 440 aaKnown RBP8.28□□□□□ -1.08
CDH1-208ENST00000565810 ORC1Q13415 861 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 TDRD12Q587J7 1177 aaKnown RBP8.28□□□□□ -1.08
CDH1-208ENST00000565810 PLPP4Q5VZY2 271 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 PRSS55Q6UWB4 352 aaPredicted RBP8.28□□□□□ -1.08
CDH1-208ENST00000565810 SLC47A2Q86VL8 602 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 ZNF677Q86XU0 584 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 SPATA2LQ8IUW3 424 aaPredicted RBP8.28□□□□□ -1.08
CDH1-208ENST00000565810 TC2NQ8N9U0 490 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 SLC4A11Q8NBS3 891 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 B3GALNT2Q8NCR0 500 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 MYCBPAPQ8TBZ2 947 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 WHAMMQ8TF30 809 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 C2orf15Q8WU43 125 aaKnown RBP8.28□□□□□ -1.08
CDH1-208ENST00000565810 PPP2R3CQ969Q6 453 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 CYFIP2Q96F07 1278 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 PANX2Q96RD6 677 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 TWNKQ96RR1 684 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 DNAJC7Q99615 494 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 MED10Q9BTT4 135 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 VN1R3Q9BXE9 311 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 ZCWPW1Q9H0M4 648 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 DPEP3Q9H4B8 488 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 DEF6Q9H4E7 631 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms