RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 HSFX1Q9UBD0 423 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 DCHS1Q96JQ0 3298 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 FRYLO94915 3013 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 EXTL3O43909 919 aa25.59■■□□□ 1.69
RAB40C-209ENST00000565511 HAPLN1P10915 354 aaPredicted RBP25.59■■□□□ 1.69
RAB40C-209ENST00000565511 RPS9P46781 194 aaKnown RBP25.59■■□□□ 1.69
RAB40C-209ENST00000565511 MTAPQ13126 283 aa25.59■■□□□ 1.69
RAB40C-209ENST00000565511 GPR158Q5T848 1215 aa25.59■■□□□ 1.69
RAB40C-209ENST00000565511 ZFYVE19Q96K21 471 aa25.59■■□□□ 1.69
RAB40C-209ENST00000565511 ZNF560Q96MR9 790 aa25.59■■□□□ 1.69
RAB40C-209ENST00000565511 MTMR12Q9C0I1 747 aa25.59■■□□□ 1.69
RAB40C-209ENST00000565511 SMG9Q9H0W8 520 aaKnown RBP25.59■■□□□ 1.69
RAB40C-209ENST00000565511 TRPV5Q9NQA5 729 aa25.59■■□□□ 1.69
RAB40C-209ENST00000565511 KBTBD4Q9NVX7 518 aa25.59■■□□□ 1.69
RAB40C-209ENST00000565511 ZNF263O14978 683 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 FCHO2Q0JRZ9 810 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 BFSP1Q12934 665 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 ALCAMQ13740 583 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 FOXD4L6Q3SYB3 417 aaPredicted RBP25.58■■□□□ 1.69
RAB40C-209ENST00000565511 FOXD4L3Q6VB84 417 aaPredicted RBP25.58■■□□□ 1.69
RAB40C-209ENST00000565511 TMEM150AQ86TG1 271 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 SUMF1Q8NBK3 374 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 FAM200AQ8TCP9 573 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 DHX58Q96C10 678 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 PKMYT1Q99640 499 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 TRIM9Q9C026 710 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 GPR88Q9GZN0 384 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 TNMDQ9H2S6 317 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 PRMT8Q9NR22 394 aaPredicted RBP25.58■■□□□ 1.69
RAB40C-209ENST00000565511 FBXO4Q9UKT5 387 aa25.58■■□□□ 1.69
RAB40C-209ENST00000565511 DMXL1Q9Y485 3027 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 ZNF638Q14966 1978 aaKnown RBP25.57■■□□□ 1.68
RAB40C-209ENST00000565511 PPP6R2O75170 966 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 ACAT1P24752 427 aaKnown RBP25.57■■□□□ 1.68
RAB40C-209ENST00000565511 CASP1P29466 404 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 MAGEA9P43362 315 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 SDHAF4Q5VUM1 108 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 CBWD2Q8IUF1 395 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 CCDC65Q8IXS2 484 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 THEM5Q8N1Q8 247 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 OR5B17Q8NGF7 314 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 FAM3CQ92520 227 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 SNX21Q969T3 373 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 NELL2Q99435 816 aa25.57■■□□□ 1.68
RAB40C-209ENST00000565511 CEP250Q9BV73 2442 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 SLC38A8A6NNN8 435 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 HMGA1P17096 107 aaKnown RBP25.56■■□□□ 1.68
RAB40C-209ENST00000565511 TUFMP49411 452 aaKnown RBP25.56■■□□□ 1.68
RAB40C-209ENST00000565511 PKP1Q13835 747 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 ZNF528Q3MIS6 628 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 TXNDC11Q6PKC3 985 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 ITIH5Q86UX2 942 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 GPD1LQ8N335 351 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 DCLK2Q8N568 766 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 CSGALNACT2Q8N6G5 542 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 TTC8Q8TAM2 541 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 SPPL2BQ8TCT7 592 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 NELL1Q92832 810 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 PI4K2AQ9BTU6 479 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 CHRDQ9H2X0 955 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 SEMA4AQ9H3S1 761 aa25.56■■□□□ 1.68
RAB40C-209ENST00000565511 MRPS17Q9Y2R5 130 aaKnown RBP25.56■■□□□ 1.68
RAB40C-209ENST00000565511 MAN2B1O00754 1011 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 CHADO15335 359 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 YEATS4O95619 227 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 LDHAP00338 332 aaKnown RBP25.55■■□□□ 1.68
RAB40C-209ENST00000565511 TDGF1P13385 188 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 CCNE1P24864 410 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 PNPLA4P41247 253 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 GAS6Q14393 721 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 ZC3H14Q6PJT7 736 aaKnown RBP25.55■■□□□ 1.68
RAB40C-209ENST00000565511 EPM2AIP1Q7L775 607 aaPredicted RBP25.55■■□□□ 1.68
RAB40C-209ENST00000565511 LRRC52Q8N7C0 313 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 RIN3Q8TB24 985 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 SLC46A2Q9BY10 475 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 TMEM206Q9H813 350 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 ITGA11Q9UKX5 1188 aa25.55■■□□□ 1.68
RAB40C-209ENST00000565511 ASIC1P78348 528 aa25.54■■□□□ 1.68
RAB40C-209ENST00000565511 VEPH1Q14D04 833 aa25.54■■□□□ 1.68
RAB40C-209ENST00000565511 YAF2Q8IY57 180 aa25.54■■□□□ 1.68
RAB40C-209ENST00000565511 DCP1BQ8IZD4 617 aaKnown RBP25.54■■□□□ 1.68
RAB40C-209ENST00000565511 C2orf15Q8WU43 125 aaKnown RBP25.54■■□□□ 1.68
RAB40C-209ENST00000565511 E2F7Q96AV8 911 aa25.54■■□□□ 1.68
RAB40C-209ENST00000565511 ZNF396Q96N95 335 aaPredicted RBP25.54■■□□□ 1.68
RAB40C-209ENST00000565511 TASP1Q9H6P5 420 aa25.54■■□□□ 1.68
RAB40C-209ENST00000565511 LMAN1LQ9HAT1 526 aa25.54■■□□□ 1.68
RAB40C-209ENST00000565511 RBM12Q9NTZ6 932 aaKnown RBP25.54■■□□□ 1.68
RAB40C-209ENST00000565511 DDX43Q9NXZ2 648 aaKnown RBP25.54■■□□□ 1.68
RAB40C-209ENST00000565511 PCDHB5Q9Y5E4 795 aa25.54■■□□□ 1.68
RAB40C-209ENST00000565511 PTPRDP23468 1912 aa25.54■■□□□ 1.68
RAB40C-209ENST00000565511 GREB1Q4ZG55 1949 aa25.54■■□□□ 1.68
RAB40C-209ENST00000565511 ANAPC1Q9H1A4 1944 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 CUTAO60888 179 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 KRT19P08727 400 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 CHRNB1P11230 501 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 TNK2Q07912 1038 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 INTS6LQ5JSJ4 861 aaKnown RBP25.53■■□□□ 1.68
RAB40C-209ENST00000565511 ZBTB44Q8NCP5 570 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 CACTINQ8WUQ7 758 aaKnown RBP25.53■■□□□ 1.68
RAB40C-209ENST00000565511 INTS13Q9NVM9 706 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms