RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MRPL38Q96DV4 380 aaKnown RBP11.84□□□□□ -0.51
SF3B3-205ENST00000564899 PAAF1Q9BRP4 392 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 SDCBP2Q9H190 292 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 DEF6Q9H4E7 631 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 CISHQ9NSE2 258 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 ARHGAP20Q9P2F6 1191 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 MUTYHQ9UIF7 546 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 BZW2Q9Y6E2 419 aaKnown RBP11.84□□□□□ -0.51
SF3B3-205ENST00000564899 NLRC5Q86WI3 1866 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 PDCD11Q14690 1871 aaKnown RBP11.83□□□□□ -0.52
SF3B3-205ENST00000564899 SSU72P8A0A1W2PR75 194 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 CYP26A1O43174 497 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 B4GALT3O60512 393 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 DGKIO75912 1065 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 B3GAT3O94766 335 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 CSPG5O95196 566 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 GTF2F1P35269 517 aaKnown RBP eCLIP11.83□□□□□ -0.52
SF3B3-205ENST00000564899 CYLC1P35663 651 aaPredicted RBP11.83□□□□□ -0.52
SF3B3-205ENST00000564899 EIF4A3P38919 411 aaKnown RBP11.83□□□□□ -0.52
SF3B3-205ENST00000564899 OR1G1P47890 313 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 CDH8P55286 799 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 LILRA4P59901 499 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 HTRA4P83105 476 aaPredicted RBP11.83□□□□□ -0.52
SF3B3-205ENST00000564899 COL19A1Q14993 1142 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 PAN2Q504Q3 1202 aaKnown RBP11.83□□□□□ -0.52
SF3B3-205ENST00000564899 SMYD5Q6GMV2 418 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 DCLRE1AQ6PJP8 1040 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 RAD9BQ6WBX8 426 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 COLGALT2Q8IYK4 626 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 TTC39CQ8N584 583 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 C3orf58Q8NDZ4 430 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 SP7Q8TDD2 431 aaPredicted RBP11.83□□□□□ -0.52
SF3B3-205ENST00000564899 RABGGTAQ92696 567 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 TOP1MTQ969P6 601 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 CCDC42Q96M95 316 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 HAUS4Q9H6D7 363 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 NHEJ1Q9H9Q4 299 aaPredicted RBP11.83□□□□□ -0.52
SF3B3-205ENST00000564899 GDAP2Q9NXN4 497 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 PYCARDQ9ULZ3 195 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 CNTN6Q9UQ52 1028 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 ZKSCAN5Q9Y2L8 839 aa11.83□□□□□ -0.52
SF3B3-205ENST00000564899 HUS1O60921 280 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 KIF4AO95239 1232 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 LINC00271P0C7V0 271 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 PAX3P23760 479 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 IGFBP6P24592 240 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-205ENST00000564899 CLCN1P35523 988 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 AARSP49588 968 aaKnown RBP eCLIP11.82□□□□□ -0.521e-6■■□□□ 12.5
SF3B3-205ENST00000564899 PDE6CP51160 858 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 ZNF132P52740 706 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 BPIFB4P59827 614 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 PTK2Q05397 1052 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 INCA1Q0VD86 236 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-205ENST00000564899 MTF1Q14872 753 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 ZNF394Q53GI3 561 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 DSTYKQ6XUX3 929 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 ZNF571Q7Z3V5 609 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-205ENST00000564899 SLC47A2Q86VL8 602 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 CCDC170Q8IYT3 715 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 TOP6BLQ8N6T0 577 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 HASPINQ8TF76 798 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 SENP8Q96LD8 212 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 MRPL45Q9BRJ2 306 aaKnown RBP11.82□□□□□ -0.52
SF3B3-205ENST00000564899 TMEM175Q9BSA9 504 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 FAM124BQ9H5Z6 455 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-205ENST00000564899 NRDE2Q9H7Z3 1164 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 ALG13Q9NP73 1137 aaKnown RBP11.82□□□□□ -0.52
SF3B3-205ENST00000564899 DNAJB4Q9UDY4 337 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 BARX2Q9UMQ3 279 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-205ENST00000564899 L1RE1Q9UN81 338 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 PRG3Q9Y2Y8 225 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-205ENST00000564899 TTC3P53804 2025 aa11.82□□□□□ -0.52
SF3B3-205ENST00000564899 TMEM189-UBE2V1I3L0A0 370 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 CYB561D2O14569 222 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 LINC01565O15544 149 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 AKR1B10O60218 316 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 CILPO75339 1184 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 TACC1O75410 805 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 ODC1P11926 461 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 CYP11B1P15538 503 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 ANXA13P27216 316 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 GNA15P30679 374 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 KIF11P52732 1056 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 NDST1P52848 882 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 SOWAHAQ2M3V2 549 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 TOGARAM2Q6ZUX3 1019 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 DPH6Q7L8W6 267 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 NOP9Q86U38 636 aaKnown RBP11.81□□□□□ -0.52
SF3B3-205ENST00000564899 ADHFE1Q8IWW8 467 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 ADGRF2Q8IZF7 708 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 APPL2Q8NEU8 664 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 OR6B3Q8NGW1 331 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 EPS8L1Q8TE68 723 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 PABPC5Q96DU9 382 aaKnown RBP11.81□□□□□ -0.52
SF3B3-205ENST00000564899 AGPAT1Q99943 283 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.81□□□□□ -0.52
SF3B3-205ENST00000564899 ACP6Q9NPH0 428 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 CLDND1Q9NY35 253 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms