RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 LDHAP00338 332 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 TNFSF9P41273 254 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 NAMPTP43490 491 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 VCPP55072 806 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 SLC8A3P57103 927 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 GAD2Q05329 585 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 PDIA2Q13087 525 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 NR1H3Q13133 447 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 MORF4L2Q15014 288 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 SLC1A5Q15758 541 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 DNAJC24Q6P3W2 148 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 PDGFDQ9GZP0 370 aaPredicted RBP16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 DHX33Q9H6R0 707 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 UBN1Q9NPG3 1134 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 CYP39A1Q9NYL5 469 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 DRG1Q9Y295 367 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 TCRBV5S1A1TA0A578 114 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 SGK1O00141 431 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 PIGRP01833 764 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 PAX7P23759 505 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 ABCD1P33897 745 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 BACE1P56817 501 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 SPARCL1Q14515 664 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 TMEM132BQ14DG7 1078 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 CYP4A22Q5TCH4 519 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 UTP4Q969X6 686 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 ERP27Q96DN0 273 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 SMC6Q96SB8 1091 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 FZD1Q9UP38 647 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 CHKBQ9Y259 395 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 C15orf41Q9Y2V0 281 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 ADGRA2Q96PE1 1338 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 CA4P22748 312 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 ARL2P36404 184 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 CCDC15Q0P6D6 951 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 TFDP3Q5H9I0 405 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 ERICH1Q86X53 443 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 WDTC1Q8N5D0 677 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 ZNF302Q9NR11 478 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 OATP04181 439 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 FGFR1P11362 822 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 CDKN2BP42772 138 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 TGFB2P61812 414 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 DYNLT1P63172 113 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 MCL1Q07820 350 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 FSTL1Q12841 308 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 MOGSQ13724 837 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 NBPF12Q5TAG4 269 aaPredicted RBP16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 LRRC38Q5VT99 294 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 UBR7Q8N806 425 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 FBF1Q8TES7 1133 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 CDHR1Q96JP9 859 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 MAK16Q9BXY0 300 aaKnown RBP16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 IMPG2Q9BZV3 1241 aa16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 TRIM6Q9C030 488 aaPredicted RBP16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 MAFBQ9Y5Q3 323 aaPredicted RBP16.31■□□□□ 0.2
GTF3C1-205ENST00000564747 CALB1P05937 261 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 KCNA3P22001 575 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 CCND1P24385 295 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 HMGCS2P54868 508 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 GPX6P59796 221 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 MYL6P60660 151 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 MTM1Q13496 603 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 PDK4Q16654 411 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 GPAT2Q6NUI2 795 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 CENPUQ71F23 418 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 ZBTB33Q86T24 672 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 VSIG1Q86XK7 387 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 TAB3Q8N5C8 712 aaPredicted RBP16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 MAB21L3Q8N8X9 362 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 SLC7A3Q8WY07 619 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 TMEM237Q96Q45 408 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 NOP53Q9NZM5 478 aaKnown RBP16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 KCNG1Q9UIX4 513 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 DIAPH2O60879 1101 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 ASS1P00966 412 aaKnown RBP16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 WEE2P0C1S8 567 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 DPEP1P16444 411 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 TARSP26639 723 aaKnown RBP16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 SKIV2L2P42285 1042 aaKnown RBP16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 YARSP54577 528 aaKnown RBP16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 SMTNL2Q2TAL5 461 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 GNPTABQ3T906 1256 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 PPP1R2P3Q6NXS1 205 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 NKD2Q969F2 451 aaPredicted RBP16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 MTMR12Q9C0I1 747 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 CISHQ9NSE2 258 aa16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 COL11A1P12107 1806 aaPredicted RBP16.3■□□□□ 0.2
GTF3C1-205ENST00000564747 TYROBPO43914 113 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 EDF1O60869 148 aaKnown RBP16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 NEBLO76041 1014 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 ITGAVP06756 1048 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 SSTR1P30872 391 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 GDF10P55107 478 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 TNFAIP1Q13829 316 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 EFTUD2Q15029 972 aaKnown RBP eCLIP16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 SETDB1Q15047 1291 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 KCNT1Q5JUK3 1230 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 PPP1R15BQ5SWA1 713 aa16.29■□□□□ 0.2
GTF3C1-205ENST00000564747 CIAPIN1Q6FI81 312 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms