RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 GDAP2Q9NXN4 497 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 RBAKQ9NYW8 714 aaPredicted RBP13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 TBC1D7Q9P0N9 293 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 R3HCC1Q9Y3T6 440 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 R4GN57 208 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 SCN1AP35498 2009 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 SPTBN4Q9H254 2564 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 ZNF233A6NK53 670 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 SHISA7A6NL88 538 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 ARNTLO00327 626 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 GJA1P17302 382 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 DDX6P26196 483 aaKnown RBP eCLIP13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 GABRR2P28476 465 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 LHX1P48742 406 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 MYL7Q01449 175 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 CSTF1Q05048 431 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 GPR158Q5T848 1215 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 DPH6Q7L8W6 267 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 LRRTM3Q86VH5 581 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 CSGALNACT2Q8N6G5 542 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 C1orf127Q8N9H9 656 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 LEO1Q8WVC0 666 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 GCNAQ96QF7 691 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 SEPT5Q99719 369 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 CHRDQ9H2X0 955 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 MAGEF1Q9HAY2 307 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 ABCB6Q9NP58 842 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 PRMT8Q9NR22 394 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 THG1LQ9NWX6 298 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 AGAP1Q9UPQ3 857 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 PCDHB5Q9Y5E4 795 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 PIAS3Q9Y6X2 628 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 FANCMQ8IYD8 2048 aa13.12□□□□□ -0.31
GTF3C1-204ENST00000564664 ANK1P16157 1881 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 A0A087X0B3 334 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 NRG2O14511 850 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 EIF3DO15371 548 aaKnown RBP eCLIP13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 CUTAO60888 179 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 FAM163BP0C2L3 166 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 CSH1P0DML2 217 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 CSH2P0DML3 217 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 CASP5P51878 434 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 RPL10AP62906 217 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 MYO1EQ12965 1108 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 DUOXA2Q1HG44 320 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 RALGPS2Q86X27 583 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 TOP6BLQ8N6T0 577 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 GPR161Q8N6U8 529 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 PDILTQ8N807 584 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 ZBTB44Q8NCP5 570 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 RUBCNQ92622 972 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 SAAL1Q96ER3 474 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 ANKRD36BP1Q96IX9 119 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 CBWD1Q9BRT8 395 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 IKZF4Q9H2S9 585 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 LMAN1LQ9HAT1 526 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 GTF3C3Q9Y5Q9 886 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 ZNF292O60281 2723 aa13.11□□□□□ -0.31
GTF3C1-204ENST00000564664 LILRB5O75023 590 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 PRPF6O94906 941 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 ITGB3P05106 788 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 TMEM191BP0C7N4 346 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 CHRNB1P11230 501 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 ATF6P18850 670 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 PCSK1P29120 753 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 POLR2BP30876 1174 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 CCR3P51677 355 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 KPNA1P52294 538 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 MTAPQ13126 283 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 LRRC32Q14392 662 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 E2F4Q16254 413 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 DGKKQ5KSL6 1271 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 SYNPOQ8N3V7 929 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 TTC9BQ8N6N2 239 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 CELF5Q8N6W0 485 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 SUMF1Q8NBK3 374 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 CXorf38Q8TB03 319 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 ZNF507Q8TCN5 953 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 BPIFB1Q8TDL5 484 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 C7orf25Q9BPX7 421 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 MKNK1Q9BUB5 465 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 TRIM9Q9C026 710 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 INTS13Q9NVM9 706 aa13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 DDX43Q9NXZ2 648 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 ABI2Q9NYB9 513 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 CGNQ9P2M7 1197 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 UXTQ9UBK9 157 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 NDRG2Q9UN36 371 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-204ENST00000564664 WDR87Q6ZQQ6 2873 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 MYBPHLA2RUH7 354 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 GABRDO14764 452 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 PRPF40AO75400 957 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 SOAT2O75908 522 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms