RNA–Protein interactions for RNA: ENST00000564404.5

TRAPPC2L-207, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-207ENST00000564404 VEPH1Q14D04 833 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 TAF12Q16514 161 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 DUOXA2Q1HG44 320 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 ITIH5Q86UX2 942 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 LRRTM3Q86VH5 581 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 TMC8Q8IU68 726 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 WDR49Q8IV35 697 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 DCP1BQ8IZD4 617 aaKnown RBP13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 XXYLT1Q8NBI6 393 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 SHKBP1Q8TBC3 707 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 ZSCAN18Q8TBC5 510 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 SPPL2BQ8TCT7 592 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 PSMG2Q969U7 264 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 ELSPBP1Q96BH3 223 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 SHDQ96IW2 340 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 ZSWIM3Q96MP5 696 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 ASB16Q96NS5 453 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 FNBP1Q96RU3 617 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 LPIN3Q9BQK8 851 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 FOXQ1Q9C009 403 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 DDX43Q9NXZ2 648 aaKnown RBP13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 ASB3Q9Y575 518 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 CFAP54Q96N23 3096 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 FANCMQ8IYD8 2048 aa13.03□□□□□ -0.32
TRAPPC2L-207ENST00000564404 HELZP42694 1942 aaKnown RBP13.02□□□□□ -0.32
TRAPPC2L-207ENST00000564404 KLRC4O43908 158 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 DCNP07585 359 aaKnown RBP13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 ATF6P18850 670 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 FCARP24071 287 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 GABRR2P28476 465 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 SYKP43405 635 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 MYL7Q01449 175 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 CYP24A1Q07973 514 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 BECN1Q14457 450 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 MLF2Q15773 248 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 KNOP1Q1ED39 458 aaKnown RBP13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 BMT2Q1RMZ1 405 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 KMT5BQ4FZB7 885 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 SLC44A4Q53GD3 710 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 PHLDB3Q6NSJ2 640 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 DNAJB7Q7Z6W7 309 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 CCDC105Q8IYK2 499 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 ADGRF2Q8IZF7 708 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 TMEM86AQ8N2M4 240 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 CXorf38Q8TB03 319 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 GIPC2Q8TF65 315 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 C2orf15Q8WU43 125 aaKnown RBP13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 SMARCD2Q92925 531 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 CCDC127Q96BQ5 260 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 HPDLQ96IR7 371 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 LRRC3Q9BY71 257 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 SCAND2PQ9GZW5 306 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 BRD9Q9H8M2 597 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 ZNF334Q9HCZ1 680 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 TMLHEQ9NVH6 421 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 GDAP2Q9NXN4 497 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 HSFX1Q9UBD0 423 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 USP25Q9UHP3 1055 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 SIT1Q9Y3P8 196 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 PCDHB5Q9Y5E4 795 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 WDR87Q6ZQQ6 2873 aa13.02□□□□□ -0.33
TRAPPC2L-207ENST00000564404 ZFHX2Q9C0A1 2572 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 EXOC3O60645 756 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 CLSTN1O94985 981 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 HAPLN1P10915 354 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 VIPR2P41587 438 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 NDUFA8P51970 172 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 SNRPFP62306 86 aaKnown RBP13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 SMARCB1Q12824 385 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 STK4Q13043 487 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 STXBP5Q5T5C0 1151 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 VITQ6UXI7 678 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 TPRG1Q6ZUI0 275 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 GPIHBP1Q8IV16 184 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 TOP6BLQ8N6T0 577 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 FSIP1Q8NA03 581 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 DTWD2Q8NBA8 298 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 KIAA0895Q8NCT3 520 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 PJA1Q8NG27 643 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 GCNAQ96QF7 691 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 CGRRF1Q99675 332 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 PI4K2AQ9BTU6 479 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 TRMT61BQ9BVS5 477 aaKnown RBP13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 GPR88Q9GZN0 384 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 ATXN3LQ9H3M9 355 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 GDPD2Q9HCC8 539 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 CGNQ9P2M7 1197 aaKnown RBP13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 HPSEQ9Y251 543 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 ATG2BQ96BY7 2078 aa13.01□□□□□ -0.33
TRAPPC2L-207ENST00000564404 DMDP11532 3685 aa13□□□□□ -0.33
TRAPPC2L-207ENST00000564404 KANSL1LA0AUZ9 987 aa13□□□□□ -0.33
TRAPPC2L-207ENST00000564404 HCRTO43612 131 aa13□□□□□ -0.33
TRAPPC2L-207ENST00000564404 PRPF40AO75400 957 aaKnown RBP13□□□□□ -0.33
TRAPPC2L-207ENST00000564404 FGF19O95750 216 aa13□□□□□ -0.33
TRAPPC2L-207ENST00000564404 RPN1P04843 607 aaKnown RBP13□□□□□ -0.33
TRAPPC2L-207ENST00000564404 PRR29P0C7W0 189 aa13□□□□□ -0.33
TRAPPC2L-207ENST00000564404 PSMC3P17980 439 aa13□□□□□ -0.33
TRAPPC2L-207ENST00000564404 CD72P21854 359 aa13□□□□□ -0.33
TRAPPC2L-207ENST00000564404 PCSK1P29120 753 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms