RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 FRMD5Q7Z6J6 570 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 POP5Q969H6 163 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 TMEM245Q9H330 911 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 COPRSQ9NQ92 184 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 AVENQ9NQS1 362 aaPredicted RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 LNPEPQ9UIQ6 1025 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 VCLP18206 1134 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 FDFT1P37268 417 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ENPEPQ07075 957 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 KIF19Q2TAC6 998 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TIMM50Q3ZCQ8 353 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 CCDC157Q569K6 752 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 RIPOR1Q6ZS17 1223 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 PIK3C3Q8NEB9 887 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TPCN2Q8NHX9 752 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 PROX1Q92786 737 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 RNPEPQ9H4A4 650 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ANKHQ9HCJ1 492 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 A0A1W2PQ72 361 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ZBED4O75132 1171 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 NAT1P18440 290 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 IL32P24001 234 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TRAF3Q13114 568 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 PRPSAP1Q14558 356 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 SDE2Q6IQ49 451 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 C6orf89Q6UWU4 347 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 CCDC149Q6ZUS6 474 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 WNK4Q96J92 1243 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 OR2B2Q9GZK3 357 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 GRID1Q9ULK0 1009 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 CAPN6Q9Y6Q1 641 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ILVBLA1L0T0 632 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 FCHO1O14526 889 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TSPAN1O60635 241 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TMEM253P0C7T8 217 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 NUDT2P50583 147 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ATP2C1P98194 919 aaPredicted RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 AKAP4Q5JQC9 854 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TTBK2Q6IQ55 1244 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 RHOT1Q8IXI2 618 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 RORBQ92753 470 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 PHF21AQ96BD5 680 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 IGSF9Q9P2J2 1179 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 IQGAP3Q86VI3 1631 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 FAM153BP0C7A2 387 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 P4HA1P13674 534 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 PTK7Q13308 1070 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 PDK4Q16654 411 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 FAM153CQ494X1 144 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ARID3BQ8IVW6 561 aaPredicted RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 C4orf33Q8N1A6 199 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 AMER2Q8N7J2 671 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 WDR36Q8NI36 951 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 PDCD6IPQ8WUM4 868 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 NT5C1BQ96P26 610 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TEX12Q9BXU0 123 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 PADI4Q9UM07 663 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ERVK-11Q9UQG0 969 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ADGRA2Q96PE1 1338 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 FYNP06241 537 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 HOXB6P17509 224 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 CNTFP26441 200 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TBC1D25Q3MII6 688 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ULK2Q8IYT8 1036 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 SETD9Q8NE22 299 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ZBTB18Q99592 522 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 HNRNPABQ99729 332 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 ARPC5LQ9BPX5 153 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 NUP85Q9BW27 656 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 APOL6Q9BWW8 343 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 VPS11Q9H270 941 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 KIAA0556O60303 1618 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 PNPLA7Q6ZV29 1317 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 F8W810 466 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ZNF862O60290 1169 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 CBX6O95503 412 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 SNRPAP09012 282 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 SOX5P35711 763 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TUFMP49411 452 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 BCAP31P51572 246 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ERVK-9P63128 1117 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 PUS10Q3MIT2 529 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 TMEM126BQ8IUX1 230 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 CCDC36Q8IYA8 594 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 C19orf18Q8NEA5 215 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 AFG1LQ8WV93 481 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 HSPH1Q92598 858 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 SNX27Q96L92 541 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 GCNAQ96QF7 691 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 RNF38Q9H0F5 515 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 CDC42EP4Q9H3Q1 356 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 PCMTD2Q9NV79 361 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 AP4B1Q9Y6B7 739 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TRIM64A6NGJ6 449 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 TRIM64BA6NI03 449 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SLCO1B7G3V0H7 640 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 ABHD2P08910 425 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 AKR1D1P51857 326 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 CSE1LP55060 971 aaKnown RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 PUDPQ08623 228 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms