RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 SAYSD1Q9NPB0 183 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 ACSS2Q9NR19 701 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 SACM1LQ9NTJ5 587 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 SEPT11Q9NVA2 429 aaKnown RBP5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 ATP6V0A2Q9Y487 856 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 SNX8Q9Y5X2 465 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 SHPRHQ149N8 1683 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 SSH2Q76I76 1423 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 PI4K2BG5E9Z4 385 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 INO80B-WBP1J3KQ70 363 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 TM4SF5O14894 197 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 HNRNPDLO14979 420 aaKnown RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 ASNA1O43681 348 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 TBCAO75347 108 aaKnown RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 BEST1O76090 585 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 CYP17A1P05093 508 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 CSF1P09603 554 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 ABCD3P28288 659 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 MLH1P40692 756 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 CTSKP43235 329 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 POLR2FP61218 127 aaKnown RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 RPS16P62249 146 aaKnown RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 CREB5Q02930 508 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 NOGQ13253 232 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 KCNAB2Q13303 367 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 ACVR2BQ13705 512 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 EIF4A2Q14240 407 aaKnown RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 METTL24Q5JXM2 366 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 MAP3K21Q5TCX8 1036 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 CYP4F22Q6NT55 531 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 CRTC3Q6UUV7 619 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 RAPH1Q70E73 1250 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 TSPYL5Q86VY4 417 aaPredicted RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 LYSMD2Q8IV50 215 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 ZNF619Q8N2I2 560 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 FANCBQ8NB91 859 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 GLIS1Q8NBF1 620 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 RNF214Q8ND24 703 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 RBM18Q96H35 190 aaKnown RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 CHAMP1Q96JM3 812 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 PIGSQ96S52 555 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 UBL7Q96S82 380 aaPredicted RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 SLX1AQ9BQ83 275 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 PI4K2AQ9BTU6 479 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 ITPAQ9BY32 194 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 EIF2B3Q9NR50 452 aaKnown RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 RABL2AQ9UBK7 228 aaPredicted RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 TMPRSS11EQ9UL52 423 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 PCDHA3Q9Y5H8 950 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 PIAS3Q9Y6X2 628 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 XIRP1Q702N8 1843 aaKnown RBP5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 CRB1P82279 1406 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 MAP3K19Q56UN5 1328 aa5.7□□□□□ -1.5
VPS35P1-201ENST00000563400 USP32Q8NFA0 1604 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 NT5C1B-RDH14C9J2C7 533 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 MAN2B1O00754 1011 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 UBE2CO00762 179 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 COBLO75128 1261 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 DGKIO75912 1065 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 TMEM63AO94886 807 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 ITGA5P08648 1049 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 FSTP19883 344 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 CST5P28325 142 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 STAT5AP42229 794 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 MCM2P49736 904 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 HK3P52790 923 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 PPP5CP53041 499 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 NLRP5P59047 1200 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 IL1RL1Q01638 556 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 MC1RQ01726 317 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 C17orf67Q0P5P2 114 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 SEMA3AQ14563 771 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 TTLL4Q14679 1199 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 GPR19Q15760 415 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 TMEM266Q2M3C6 531 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 KRTCAP3Q53RY4 240 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 EXOSC6Q5RKV6 272 aaKnown RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 UBXN11Q5T124 520 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 KRT27Q7Z3Y8 459 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 THAP5Q7Z6K1 395 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 GALNT7Q86SF2 657 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 Q8N3U1 123 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 C12orf50Q8NA57 414 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 DTWD2Q8NBA8 298 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 OR2I1PQ8NGU4 316 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 SH3RF2Q8TEC5 729 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 RAB24Q969Q5 203 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 IQCDQ96DY2 449 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 ASIC4Q96FT7 647 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 LRRC46Q96FV0 321 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 FAM46AQ96IP4 442 aaKnown RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 MYRFLQ96LU7 910 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 TWNKQ96RR1 684 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 FNBP1Q96RU3 617 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 EPS8L2Q9H6S3 715 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 TM7SF3Q9NS93 570 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 POLKQ9UBT6 870 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 GTF3C4Q9UKN8 822 aa5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 ZNF215Q9UL58 517 aaPredicted RBP5.69□□□□□ -1.5
VPS35P1-201ENST00000563400 AGTPBP1Q9UPW5 1226 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms